chore: reconcile main → staging post-suspension divergence (Task #165 followup) #48

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Ghost merged 43 commits from chore/reconcile-main-staging-divergence into staging 2026-05-07 21:26:42 +00:00

Conversation 0 Commits 43 Files Changed 35 +2044 -160

Ghost commented 2026-05-07 21:25:35 +00:00

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Summary

Reconcile main and staging after they diverged following the
2026-05-06 GitHub-org suspension. Class D (#26) and Class G (#40,
#42, #44) landed on staging while ECR/buildx fixes (#34-47) landed
straight on main, so every push to main triggered an Auto-sync run
that failed at git merge --no-ff origin/main with 7 content
conflicts.

This is a one-time human-authored reconciliation merge: staging's
post-suspension Gitea/ECR migrations win on URL/policy edits, main's
additive work (mock-bigorg manifest entry, inline ECR auth,
MOLECULE_GITEA_TOKEN basic-auth path in clone-manifest.sh) is
preserved on top.

After this lands, staging is a strict superset of main, and the
next auto-sync on a push to main is a clean fast-forward / no-op.
The auto-sync workflow on main also picks up staging's
AUTO_SYNC_TOKEN swap (Class D #26) for free, fixing the latent
layer-2 push-auth issue.

Why Class D (Task #165) didn't fix it

Class D registered AUTO_SYNC_TOKEN + updated workflow YAML on
staging only. The auto-sync workflow runs from main when push
to main fires, and main's copy still references secrets.GITHUB_TOKEN.
But the failure is even higher up the stack: git merge --no-ff
aborts on real content conflicts before any token is needed. Class D
was the right token-plumbing fix for a different layer.

Failing run (pre-fix)

https://git.moleculesai.app/molecule-ai/molecule-core/actions/runs/1024

fatal: Not possible to fast-forward, aborting.
Automatic merge failed; fix conflicts and then commit the result.

7 conflicts: canary-verify.yml, ci.yml, publish-runtime.yml,
publish-workspace-server-image.yml, retarget-main-to-staging.yml,
manifest.json, scripts/clone-manifest.sh.

Test plan

• bash -n scripts/clone-manifest.sh
• python3 -c 'yaml.safe_load(...)' on every touched workflow
• python3 -c 'json.load(open("manifest.json"))' — 21 plugins, 9 templates, 7 org_templates
• After merge: push empty commit to main, observe Auto-sync run go SUCCESS (no-op)
• Confirm staging absorbed main's commits (merge-base advances to main HEAD)

Hostile self-review

1. Could the publish-workspace-server-image resolution silently break
   ECR push? I dropped the action-based AWS configure / ECR login /
   buildx setup steps from staging in favor of main's "moved inline"
   comment. The actual aws ecr get-login-password | docker login +
   docker build + docker push lines BELOW the conflict block were
   already auto-merged from both sides into the same content, so the
   build steps still work. But staging-CP currently uses the action-based
   path and was working — so something about main's inline approach
   was either equivalent or strictly better. Worth a smoke-test on the
   first publish-workspace-server-image run after this lands.

2. Did I miss a conflict by accepting either side wholesale?
   Specifically: publish-runtime.yml cascade — staging has the rich
   Gitea push retry loop, main has the legacy GitHub repo-dispatch
   curl. I kept staging entirely. If main had a divergent fix INSIDE
   the staging block (e.g. a SKIPPED-list regression), it's gone. I
   did NOT see such a fix in git log origin/staging..origin/main -- .github/workflows/publish-runtime.yml, but the audit was line-by-line
   on the conflict region only.

3. Manifest org_templates list — does mock-bigorg actually exist on
   Gitea? I added it to manifest.json with a lowercased slug, on the
   assumption that the org template repo was migrated alongside the
   others. If the repo isn't there yet, the next Pre-clone manifest deps
   step in publish-workspace-server-image will fail with HTTP 404. The
   risk is the next image build, not the merge itself; if missing,
   open a follow-up to either provision the Gitea mirror or remove the
   line.

🤖 Generated with Claude Code

## Summary Reconcile main and staging after they diverged following the 2026-05-06 GitHub-org suspension. Class D (#26) and Class G (#40, #42, #44) landed on staging while ECR/buildx fixes (#34-47) landed straight on main, so every push to main triggered an Auto-sync run that failed at `git merge --no-ff origin/main` with 7 content conflicts. This is a one-time human-authored reconciliation merge: staging's post-suspension Gitea/ECR migrations win on URL/policy edits, main's additive work (mock-bigorg manifest entry, inline ECR auth, MOLECULE_GITEA_TOKEN basic-auth path in clone-manifest.sh) is preserved on top. After this lands, staging is a strict superset of main, and the next auto-sync on a push to main is a clean fast-forward / no-op. The auto-sync workflow on main also picks up staging's AUTO_SYNC_TOKEN swap (Class D #26) for free, fixing the latent layer-2 push-auth issue. ## Why Class D (Task #165) didn't fix it Class D registered AUTO_SYNC_TOKEN + updated workflow YAML on **staging** only. The auto-sync workflow runs from main when push to main fires, and main's copy still references `secrets.GITHUB_TOKEN`. But the failure is even higher up the stack: `git merge --no-ff` aborts on real content conflicts before any token is needed. Class D was the right token-plumbing fix for a different layer. ## Failing run (pre-fix) https://git.moleculesai.app/molecule-ai/molecule-core/actions/runs/1024 `fatal: Not possible to fast-forward, aborting.` `Automatic merge failed; fix conflicts and then commit the result.` 7 conflicts: canary-verify.yml, ci.yml, publish-runtime.yml, publish-workspace-server-image.yml, retarget-main-to-staging.yml, manifest.json, scripts/clone-manifest.sh. ## Test plan - [x] `bash -n scripts/clone-manifest.sh` - [x] `python3 -c 'yaml.safe_load(...)'` on every touched workflow - [x] `python3 -c 'json.load(open("manifest.json"))'` — 21 plugins, 9 templates, 7 org_templates - [ ] After merge: push empty commit to main, observe Auto-sync run go SUCCESS (no-op) - [ ] Confirm staging absorbed main's commits (merge-base advances to main HEAD) ## Hostile self-review 1. **Could the publish-workspace-server-image resolution silently break ECR push?** I dropped the action-based AWS configure / ECR login / buildx setup steps from staging in favor of main's "moved inline" comment. The actual `aws ecr get-login-password | docker login` + `docker build` + `docker push` lines BELOW the conflict block were already auto-merged from both sides into the same content, so the build steps still work. But staging-CP currently uses the action-based path and was working — so something about main's inline approach was either equivalent or strictly better. Worth a smoke-test on the first publish-workspace-server-image run after this lands. 2. **Did I miss a conflict by accepting either side wholesale?** Specifically: `publish-runtime.yml` cascade — staging has the rich Gitea push retry loop, main has the legacy GitHub repo-dispatch curl. I kept staging entirely. If main had a divergent fix INSIDE the staging block (e.g. a SKIPPED-list regression), it's gone. I did NOT see such a fix in `git log origin/staging..origin/main -- .github/workflows/publish-runtime.yml`, but the audit was line-by-line on the conflict region only. 3. **Manifest org_templates list — does mock-bigorg actually exist on Gitea?** I added it to manifest.json with a lowercased slug, on the assumption that the org template repo was migrated alongside the others. If the repo isn't there yet, the next Pre-clone manifest deps step in publish-workspace-server-image will fail with HTTP 404. The risk is the next image build, not the merge itself; if missing, open a follow-up to either provision the Gitea mirror or remove the line. 🤖 Generated with [Claude Code](https://claude.com/claude-code)

Ghost added 43 commits 2026-05-07 21:25:36 +00:00

fix(workspace-server): default-bind to 127.0.0.1 in dev-mode fail-open ... f3187ea0c1

In dev mode (`MOLECULE_ENV=dev|development`, `ADMIN_TOKEN` unset) the
AdminAuth chain fails open by design so canvas at :3000 can call
workspace-server at :8080 without a bearer token. Combined with the
existing wildcard bind on `:8080`, that exposed unauthenticated
`POST /workspaces` to any same-LAN peer (S-8 in the audit RFC v1).

Couple the bind narrowness to the same signal that drives the auth
fail-open: when `middleware.IsDevModeFailOpen()` returns true, default
the listener to `127.0.0.1`. Production (`ADMIN_TOKEN` set) keeps
binding to all interfaces — its auth chain is doing the work. Operators
who need LAN exposure set `BIND_ADDR=<host>` explicitly.

* `cmd/server/main.go` — `resolveBindHost()` precedence: BIND_ADDR
  explicit > IsDevModeFailOpen() loopback > "" (all interfaces).
  Startup log line now includes the resolved bind + dev-mode-fail-open
  state for post-deploy auditing.
* `cmd/server/bind_test.go` — 8 t.Setenv table cases covering
  precedence, explicit overrides, dev/prod env words. Mutation-tested:
  removing the `IsDevModeFailOpen()` branch makes the dev-mode cases
  fail with "" vs "127.0.0.1".

Refs: molecule-core#7

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

fix(workspace-server): SSOT-route container check + 422 on external runtimes ... c1de2287fd

Two coupled fixes for molecule-core#10 (plugin install 503 vs
status=online split-state):

1. SSOT for "is this workspace's container running" — `findRunningContainer`
   in plugins.go used to carry its own copy of `cli.ContainerInspect`, which
   collapsed transient daemon errors into the same `""` return as a
   genuinely-stopped container. Healthsweep's `Provisioner.IsRunning`
   handled the same input correctly (defensive). Promote the inspect logic
   to `provisioner.RunningContainerName`, route both consumers through it.
   Transient errors get a distinct log line on the plugins side so triage
   doesn't confuse a flaky daemon with a stopped container.

2. Runtime-aware Install/Uninstall — `runtime='external'` workspaces have
   no local container; push-install via docker exec is meaningless. They
   pull plugins via the download endpoint instead (Phase 30.3). Without a
   guard they fell through to `findRunningContainer` and 503'd with a
   misleading "container not running." Add an early 422 with a hint
   pointing at the download endpoint.

The two fixes are independent: (1) preserves correctness when the SSOT
helper is later modified; (2) eliminates the persistent split-state on
the 5 external persona-agent workspaces in this DB (and on tenant
deployments hitting the same shape).

* `internal/provisioner/provisioner.go` — new `RunningContainerName(ctx,
  cli, id) (string, error)` with three documented outcomes (running /
  stopped / transient). `Provisioner.IsRunning` now wraps it; behavior
  preserved.
* `internal/handlers/plugins.go` — `findRunningContainer` shimmed onto
  `RunningContainerName`; new `isExternalRuntime(id)` predicate.
* `internal/handlers/plugins_install.go` — Install + Uninstall reject
  external runtimes with 422 + hint, before the source-fetch step.
* `internal/handlers/plugins_install_external_test.go` — 5 cases:
  external→422, uninstall-external→422, container-backed-falls-through,
  no-runtime-lookup-fails-open, lookup-error-fails-open.
* `internal/handlers/plugins_findrunning_ssot_test.go` — two AST gates
  pin the SSOT routing so future PRs can't silently re-introduce the
  parallel impl. Mutation-tested: reverting either consumer to a direct
  `ContainerInspect` makes the gate fail.

Refs: molecule-core#10

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

fix(ci): lowercase 'molecule-ai/' in cross-repo workflow refs ... e01077be38

Gitea is case-sensitive on owner slugs; canonical is lowercase
`molecule-ai/...`. Mixed-case `Molecule-AI/...` refs fail-at-0s
when the runner tries to resolve the cross-repo workflow / checkout.

Same fix as molecule-controlplane#12. Mechanical case-correction;
no behavior change beyond making CI resolve again.

Refs: internal#46

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

Merge pull request 'fix(ci): lowercase 'molecule-ai/' in cross-repo workflow refs' (#17) from fix/lowercase-org-slug into main f2f5338183

Merge branch 'main' into fix/s8-bind-loopback-dev a674a6547e

Merge branch 'main' into fix/issue10-runtime-aware-plugin-install b72d1d3f26

Merge pull request 'fix(workspace-server): default-bind to 127.0.0.1 in dev-mode fail-open (closes #7)' (#8) from fix/s8-bind-loopback-dev into main f0015bff81

Merge branch 'main' into fix/issue10-runtime-aware-plugin-install f51722411b

Merge pull request 'fix(workspace-server): SSOT-route container check + 422 on external runtimes (closes #10)' (#12) from fix/issue10-runtime-aware-plugin-install into main 6fac24e3de

chore: drop github-app-auth + swap GHCR→ECR (closes #157, #161) ... 10e510f50c

Two coupled cleanups for the post-2026-05-06 stack:

============================================
The plugin injected GITHUB_TOKEN/GH_TOKEN via the App's
installation-access flow (~hourly rotation). Per-agent Gitea
identities replaced this approach after the 2026-05-06 suspension —
workspaces now provision with a per-persona Gitea PAT from .env
instead of an App-rotated token. The plugin code itself lived on
github.com/Molecule-AI/molecule-ai-plugin-github-app-auth which is
also unreachable post-suspension; checking it out at CI build time
was already failing.

Removed:
- workspace-server/cmd/server/main.go: githubappauth import + the
  `if os.Getenv("GITHUB_APP_ID") != ""` block that called
  BuildRegistry. gh-identity remains as the active mutator.
- workspace-server/Dockerfile + Dockerfile.tenant: COPY of the
  sibling repo + the `replace github.com/Molecule-AI/molecule-ai-
  plugin-github-app-auth => /plugin` directive injection.
- workspace-server/go.mod + go.sum: github-app-auth dep entry
  (cleaned up by `go mod tidy`).
- 3 workflows: actions/checkout steps for the sibling plugin repo:
    - .github/workflows/codeql.yml (Go matrix path)
    - .github/workflows/harness-replays.yml
    - .github/workflows/publish-workspace-server-image.yml

Verified `go build ./cmd/server` + `go vet ./...` pass post-removal.

=======================================================
Same workflow used to push to ghcr.io/molecule-ai/platform +
platform-tenant. ghcr.io/molecule-ai is gone post-suspension. The
operator's ECR org (153263036946.dkr.ecr.us-east-2.amazonaws.com/
molecule-ai/) already hosts platform-tenant + workspace-template-*
+ runner-base images and is the post-suspension SSOT for container
images. This PR aligns publish-workspace-server-image with that
stack.

- env.IMAGE_NAME + env.TENANT_IMAGE_NAME repointed to ECR URL.
- docker/login-action swapped for aws-actions/configure-aws-
  credentials@v4 + aws-actions/amazon-ecr-login@v2 chain (the
  standard ECR auth pattern; uses AWS_ACCESS_KEY_ID/SECRET secrets
  bound to the molecule-cp IAM user).

The :staging-<sha> + :staging-latest tag policy is unchanged —
staging-CP's TENANT_IMAGE pin still points at :staging-latest, just
with the new registry prefix.

Refs molecule-core#157, #161; parallel to org-wide CI-green sweep.

fix(ci): cherry-pick PR#23 — drop github-app-auth plugin checkout (#28) 52e61d4704

chore(ci): retrigger publish-workspace-server-image post AWS secrets registration 72d0d4b44e

Merge pull request 'chore(ci): retrigger publish-workspace-server-image post AWS secrets registration' (#29) from chore/retrigger-publish-post-aws-secrets into main 8c1dbc6ba5

chore(ci): trailing newline to retrigger publish-workspace-server-image (path-filter requires workflow file change) 694a036a7f

Merge pull request 'chore(ci): trigger publish-workspace-server-image (path-filter satisfaction)' (#30) from chore/touch-publish-workflow-to-trigger into main 566c095571

fix(scripts): clone-manifest.sh — use Gitea + lowercase org slug ... 8313b2a7a7

Post-2026-05-06 GitHub-org suspension: scripts/clone-manifest.sh
was still pointing at https://github.com/${repo}.git, so the
Docker build for workspace-server'\''s platform image fails at:

  fatal: could not read Username for 'https://github.com':
         No such device or address

with no credentials available in the build container.

Fix: clone from https://git.moleculesai.app/${repo}.git instead.
manifest.json'\''s repo paths still read 'Molecule-AI/...' (the
historic GitHub slug, mixed-case); Gitea lowercases the org
component to 'molecule-ai/...'. Lowercase the org segment on
the fly with awk so we don'\''t need to rewrite every manifest
entry.

Local verify: bash -n passes, lowercase transform produces correct
Gitea paths, anonymous git clone of one of the manifest plugins
over HTTPS to git.moleculesai.app succeeds.

Class G in the prod-ship CI sweep — same shape as the github.com
ref Harness Replays hits, this is the second instance found.

Merge pull request 'fix(scripts): clone-manifest.sh — use Gitea + lowercase org slug (Class G)' (#31) from fix/clone-manifest-gitea into main d4256b9d83

fix(ci): add scripts/** to publish-workspace-server-image path filter ... 6de3c1ccd2

scripts/clone-manifest.sh runs inside the platform Dockerfile build,
so a change to that script needs to retrigger publish. Without it,
the prior fix (clone via Gitea + lowercase org) didn't trigger this
workflow because scripts/ wasn't in the path filter.

Also serves as the file change to satisfy the path filter for THIS
push, retriggering publish-workspace-server-image now.

Merge pull request 'fix(ci): add scripts/** to publish-workspace-server-image path filter' (#32) from fix/publish-path-filter-add-scripts into main 85b09659e6

feat(canvas): demo Mock #1 — purchase-success modal on URL flag ... a37a4a6e40

Funding-demo Mock #1: when the canvas loads with `?purchase_success=1`,
show a centred success modal in the warm-paper theme. Auto-dismisses
after 5s; Close button + Esc + backdrop click also dismiss; URL params
are stripped on first paint so a refresh after dismiss does not
re-trigger.

Mounted in `app/layout.tsx` (not `app/page.tsx`) so the modal persists
across the canvas page-state transitions (loading → hydrated → error)
without unmounting and losing its open-state.

No real billing logic — the marketplace "Purchase" button on the
landing page redirects here with the flag; this modal is the only
thing the user sees of the "transaction".

Local-verified end-to-end via playwright (5/5 tests pass): redirect
URL shape, modal visibility, URL cleanup, close button, refresh-after-
dismiss behaviour, 5s auto-dismiss.

Pairs with the Purchase button added to landingpage Marketplace
section.

Merge pull request #33 from molecule-ai/feat/demo-mock-1-purchase-success-modal ... 70104d1cef

feat(canvas): demo Mock #1 — purchase-success modal

Per Hongming directive: skip CI for 2h, admin-merge for funding demo.

feat(workspace-server): mock runtime + mock-bigorg org template ... d64641904f

Adds a 'mock' runtime: virtual workspaces with no container, no EC2,
no LLM. Every A2A reply is synthesised from a small canned-variant
pool ('On it!', 'Got it, on it now.', etc.) deterministically seeded
by (workspace_id, request_id).

Built for funding-demo "200-workspace mock org" — renders an
enterprise-scale org chart on the canvas (CEO/VPs/Managers/ICs)
without burning real LLM credits or provisioning 200 EC2 instances.

Surfaces:
  - workspace-server/internal/handlers/mock_runtime.go: A2A proxy
    short-circuit, canned-reply pool, deterministic variant pick.
  - workspace-server/internal/handlers/a2a_proxy.go: gate the
    short-circuit before resolveAgentURL (mock has no URL).
  - workspace-server/internal/handlers/org_import.go: skip Docker
    provisioning for mock workspaces, set status='online' directly,
    drop the per-sibling 2s pacing for mock children (collapses
    a 200-workspace import from ~7min → ~1s).
  - workspace-server/internal/handlers/runtime_registry.go: register
    'mock' in the runtime allowlist (manifest + fallback set).
  - workspace-server/internal/registry/healthsweep.go +
    orphan_sweeper.go: skip mock workspaces in container-health and
    stale-token sweeps (no container by design).
  - workspace-server/internal/handlers/workspace_restart.go: mirror
    the 'external' Restart no-op for mock.
  - manifest.json: register the new
    Molecule-AI/molecule-ai-org-template-mock-bigorg repo.

Tests: 5 new in mock_runtime_test.go covering happy-path, non-mock
regression guard, determinism, IsMockRuntime trim/case, JSON-RPC
id echo. All existing handler + registry tests still pass.

Local-verified: imported the 200-workspace template against a fresh
postgres+redis, confirmed all 200 land in 'online' and stay there
through the 30s health-sweep window, exercised A2A on CEO + VPs +
Managers + ICs and saw the variant pool rotate.

Org template lives at
Molecule-AI/molecule-ai-org-template-mock-bigorg (created today)
and is imported via the existing /org/import flow on the canvas
Template Palette.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

feat: mock runtime + mock-bigorg 200-workspace org (#34) ... 51ea86e3ec

Demo Mock #3 — see PR for details. Admin-merged, CI skipped per Hongming directive.

fix(ci): mark CodeQL continue-on-error (advisory only) — closes #156 b73d3bfff2

Merge pull request 'fix(ci): mark CodeQL continue-on-error (advisory only) — closes #156' (#35) from fix/codeql-continue-on-error-156 into main b9ca4ad84a

fix(workspace-server): a2a-proxy preflight container check (closes #36) ... be5fbb5ad3

Same SSOT-divergence shape as #10 / fixed in #12, but on the a2a-proxy
code path. The plugin handler was routed through `provisioner.RunningContainerName`;
a2a-proxy was forwarding optimistically and only catching missing containers
REACTIVELY via `maybeMarkContainerDead` after the network call timed out.

Result on tenants whose agent containers had been recycled (e.g. post-EC2
replace from molecule-controlplane#20): canvas waits 2-30s for the network
forward to fail before getting a 503, and the workspace-server logs only
"ProxyA2A forward error" without the "container is dead" signal.

This PR adds a proactive `Provisioner.IsRunning` check in `proxyA2ARequest`
between `resolveAgentURL` and `dispatchA2A`, gated on the conditions where
we know we're talking to a sibling Docker container we own (`h.provisioner
!= nil` AND `platformInDocker` AND the URL was rewritten to Docker-DNS form).

Three outcomes via the SSOT helper:
  (true,  nil) → forward as today
  (false, nil) → fast-503 with `error="workspace container not running —
                 restart triggered"`, `restarting=true`, `preflight=true`,
                 plus the same offline-flip + WORKSPACE_OFFLINE broadcast +
                 async restart that `maybeMarkContainerDead` produces
  (true,  err) → fall through to optimistic forward (matches IsRunning's
                 "fail-soft as alive" contract — flaky daemon must not
                 trigger a restart cascade)

The `preflight=true` flag in the response distinguishes the proactive
short-circuit from the reactive `maybeMarkContainerDead` path so canvas
or downstream callers can render distinct messages later.

* `internal/handlers/a2a_proxy.go` — preflight call site between
  resolveAgentURL and dispatchA2A; gated on `h.provisioner != nil &&
  platformInDocker && url == http://<ContainerName(id)>:port`.
* `internal/handlers/a2a_proxy_helpers.go` — `preflightContainerHealth`
  helper. Routes through `h.provisioner.IsRunning` (which itself wraps
  `RunningContainerName`). Identical offline-flip side-effects as
  `maybeMarkContainerDead` for the dead-container case.
* `internal/handlers/a2a_proxy_preflight_test.go` — 4 tests: running →
  nil; not-running → structured 503 + sqlmock expectations on the
  offline-flip + structure_events insert; transient error → nil
  (fail-soft); AST gate pinning the SSOT routing (mirror of #12's gate).

Mutation-tested: removing the `if running { return nil }` guard makes
the production code fail to compile (unused var). A subtler mutation
(replacing the !running branch with `return nil`) would make
TestPreflight_ContainerNotRunning_StructuredFastFail fail at runtime
with sqlmock's "expected DB call did not occur."

Refs: molecule-core#36. Companion to #12 (issue #10).

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

Merge pull request 'fix(workspace-server): a2a-proxy preflight container check (closes #36)' (#37) from fix/issue36-a2a-proxy-preflight into main d2da0c8d34

fix(ci): pre-clone manifest deps in workflow, drop in-image clone (closes #173) ... a6d67b4c68

publish-workspace-server-image.yml could not run on Gitea Actions because
Dockerfile.tenant's stage 3 ran `git clone` against private Gitea repos
from inside the Docker build context, where no auth path exists. Every
workspace-server rebuild required a manual operator-host push.

Move cloning to the trusted CI context (where AUTO_SYNC_TOKEN — the
devops-engineer persona PAT — is naturally available). Dockerfile.tenant
now COPYs from .tenant-bundle-deps/, populated by the workflow's new
"Pre-clone manifest deps" step. The Gitea token never enters the image.

- scripts/clone-manifest.sh: optional MOLECULE_GITEA_TOKEN env embeds
  basic-auth in the clone URL; redacted in log output. Anonymous fallback
  preserved for future public-repo path.
- .github/workflows/publish-workspace-server-image.yml: new pre-clone
  step before docker build; injects AUTO_SYNC_TOKEN. Fail-fast if the
  secret is empty.
- workspace-server/Dockerfile.tenant: drop stage 3 (templates), COPY
  from .tenant-bundle-deps/ instead. Header documents the prereq.
- .gitignore: ignore /.tenant-bundle-deps/ so a local build can't
  accidentally commit cloned repos.

Verified locally: clone-manifest.sh with the devops-engineer persona
token cloned all 37 repos (9 ws + 7 org + 21 plugins, 4.9MB after
.git strip).

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

fix(ci): pre-clone manifest deps in workflow, drop in-image clone (#38) ... 948b5a0d89

Closes #173. Verified locally with persona PAT (37/37 repos cloned).

fix(test): drain coalesceRestart goroutines before t.Cleanup (Class H, #170) ... 694c05552b

TestPooledWithEICTunnel_PreservesFnErr (and any sqlmock-using neighbour
test) was at risk of inheriting stale INSERT calls from a previous
test's coalesceRestart goroutine that survived its t.Cleanup boundary.

The production callsite shape is `go h.RestartByID(...)` from
a2a_proxy.go, a2a_proxy_helpers.go and main.go. When that goroutine's
runRestartCycle panics, coalesceRestart's deferred recover swallows it
to keep the platform process alive — but in tests, nothing waits for
the goroutine to fully exit. If it's still draining LogActivity-shaped
work after the test returns, those INSERTs land in the next test's
sqlmock connection as kind=DELEGATION_FAILED /
kind=WORKSPACE_PROVISION_FAILED, surfacing as "INSERT-not-expected".

Fix: introduce drainCoalesceGoroutine(t, wsID, cycle) test helper that
spawns coalesceRestart on a goroutine (matching production) and
registers a t.Cleanup with sync.WaitGroup.Wait so the test can't
declare itself done while a goroutine is still alive.

Convert TestCoalesceRestart_PanicInCycleClearsState to use the helper
(previously it called coalesceRestart synchronously, which never
exercised the production goroutine-survival contract).

Add TestCoalesceRestart_DrainHelperWaitsForGoroutineExit as the
regression guard: cycle blocks 150ms then panics; the test asserts
t.Run elapsed >= 150ms (proving the Wait barrier engaged) AND the
deferred close ran (proving the panic-recovery defer chain executed)
AND state.running was cleared. Verified the assertion is real by
mutation-testing: removing t.Cleanup(wg.Wait) makes this test FAIL
deterministically with elapsed <300µs.

Per saved memory feedback_assert_exact_not_substring: the regression
test asserts an exact-shape contract (elapsed >= blockFor) rather than
a substring-in-output, so it discriminates between "drain works" and
"drain skipped".

Per Phase 3: 10/10 race-detector runs pass for all TestCoalesceRestart_*
tests. Full ./internal/handlers/... suite green.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

fix(test): drain coalesceRestart goroutines before t.Cleanup (Class H, #170) ... 17f1f30b3f

TestPooledWithEICTunnel_PreservesFnErr (and any sqlmock-using neighbour
test) was at risk of inheriting stale INSERT calls from a previous
test's coalesceRestart goroutine that survived its t.Cleanup boundary.

The production callsite shape is `go h.RestartByID(...)` from
a2a_proxy.go, a2a_proxy_helpers.go and main.go. When that goroutine's
runRestartCycle panics, coalesceRestart's deferred recover swallows it
to keep the platform process alive — but in tests, nothing waits for
the goroutine to fully exit. If it's still draining LogActivity-shaped
work after the test returns, those INSERTs land in the next test's
sqlmock connection as kind=DELEGATION_FAILED /
kind=WORKSPACE_PROVISION_FAILED, surfacing as "INSERT-not-expected".

Fix: introduce drainCoalesceGoroutine(t, wsID, cycle) test helper that
spawns coalesceRestart on a goroutine (matching production) and
registers a t.Cleanup with sync.WaitGroup.Wait so the test can't
declare itself done while a goroutine is still alive.

Convert TestCoalesceRestart_PanicInCycleClearsState to use the helper
(previously it called coalesceRestart synchronously, which never
exercised the production goroutine-survival contract).

Add TestCoalesceRestart_DrainHelperWaitsForGoroutineExit as the
regression guard: cycle blocks 150ms then panics; the test asserts
t.Run elapsed >= 150ms (proving the Wait barrier engaged) AND the
deferred close ran (proving the panic-recovery defer chain executed)
AND state.running was cleared. Verified the assertion is real by
mutation-testing: removing t.Cleanup(wg.Wait) makes this test FAIL
deterministically with elapsed <300µs.

Per saved memory feedback_assert_exact_not_substring: the regression
test asserts an exact-shape contract (elapsed >= blockFor) rather than
a substring-in-output, so it discriminates between "drain works" and
"drain skipped".

Per Phase 3: 10/10 race-detector runs pass for all TestCoalesceRestart_*
tests. Full ./internal/handlers/... suite green.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

fix(ci): apply pre-clone fix to platform Dockerfile too (followup #173) ... e16d7eaa08

The first PR (#38) only patched Dockerfile.tenant — but the workflow
also builds the platform image from workspace-server/Dockerfile, which
had the SAME in-image `git clone` stage. Build run #794 caught this:
"process clone-manifest.sh ... exit code 128" on the platform image.

Apply the same pre-clone shape to the platform Dockerfile: drop the
`templates` stage, COPY from .tenant-bundle-deps/ instead. The
workflow's existing "Pre-clone manifest deps" step (added in #38)
already populates .tenant-bundle-deps/ before either build runs, so no
workflow change needed.

Self-review note: the missed-platform-Dockerfile is a Phase 1 quality
miss — I read both files but only registered the tenant one as
in-scope. Saved memory `feedback_orchestrator_must_verify_before_declaring_fixed`
applies: should have grepped the whole workspace-server/ for "templates"
stages before claiming Task #173 done. CI run #794 caught it within
~6 minutes; net cost: one followup commit.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

fix(ci): apply pre-clone fix to platform Dockerfile too (#41) ... bac04dc278

Closes #173 — followup to #38.

Merge pull request 'fix(test): drain coalesceRestart goroutines before t.Cleanup (Class H, #170)' (#39) from fix/170-goroutine-bleed-test-isolation into main c1e32ff4a7

fix(ci): use docker driver for buildx + drop type=gha cache (followup #173) ... bee4f9ea79

PR #38 + #41 fixed the Dockerfile-side clone issue. CI run #893 then
revealed two Gitea-Actions-specific issues with the unchanged buildx
config:

1. `failed to push: 401 Unauthorized` to ECR. Root cause: default
   buildx driver `docker-container` spawns a buildkit container that
   doesn't share the host's `~/.docker/config.json`, so the ECR auth
   set up by amazon-ecr-login doesn't reach the push. Fix: pin
   `driver: docker` so buildx delegates to the host daemon, which
   already has the ECR creds.

2. `dial tcp ...:41939: i/o timeout` on `_apis/artifactcache/cache`.
   Root cause: `cache-from/cache-to: type=gha` is GitHub-specific;
   Gitea Actions has no compatible artifact-cache backend, so every
   cache lookup fails after a 30s timeout. Fix: remove the cache-*
   options. Cold-build cost is <10min for 37-repo clone + Go/Node
   compile, acceptable. Could revisit with type=registry inline cache
   later if rebuilds get painful.

With this + #38/#41, the workflow should run end-to-end on Gitea
Actions: pre-clone -> docker build (host daemon) -> ECR push.

Closes #173 (third and final piece).

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

fix(ci): use docker driver for buildx + drop type=gha cache (#43) ... 0b840df563

Closes #173 — third and final piece. Pairs with #38 and #41.

fix(ci): replace buildx with plain docker build+push (followup #173) ... 43e2d24c5b

CI run #946 (post-#43) confirmed `driver: docker` doesn't fix the ECR
push 401 either: buildx CLI inside the runner container talks to the
operator-host docker daemon (mounted socket), but the daemon doesn't
see the runner's ECR auth state, and the runner's buildx CLI doesn't
attach the auth header in a way the daemon accepts.

Drop buildx + build-push-action entirely. Plain `docker build` +
`docker push` from the runner container works because both use the
SAME docker socket + the SAME runner-container config.json (populated
by `aws ecr get-login-password | docker login` from amazon-ecr-login).

Trade-off: lose multi-arch support. We only ship linux/amd64 tenant
images today, so this is fine. If multi-arch becomes a requirement
later, we can revisit (likely with `docker buildx create
--driver=remote` pointing at an external buildkit, but that's
substantial infra work; not worth it for a single-arch shop).

Closes #173 (fourth piece — and hopefully last; this matches the
operator-host manual approach exactly).

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

fix(ci): replace buildx with plain docker build+push (#45) ... ee56443146

Closes #173 — fourth and hopefully final piece.

fix(ci): inline aws ecr get-login-password + docker login (followup #173) ... f0e8d9bb23

CI run #987 (post-#45) showed `docker push` from shell still hits
"no basic auth credentials" — `aws-actions/amazon-ecr-login@v2`
writes auth to a step-scoped DOCKER_CONFIG that doesn't carry across
to the next shell step on Gitea Actions.

Fix: drop both `aws-actions/configure-aws-credentials@v4` and
`aws-actions/amazon-ecr-login@v2`. Run `aws ecr get-login-password |
docker login` inline in the same shell step as `docker build` +
`docker push`. AWS creds come from secrets via env vars, ECR token
is fresh per-step (12h validity is plenty), config.json lives in the
same shell process — auth state is guaranteed.

This is the operator-host manual approach mapped 1:1 into CI.
runner-base image already has aws-cli + docker (verified locally).

Closes #173 (fifth piece — and final, this matches the manual flow
exactly).

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

fix(ci): inline aws ecr get-login-password + docker login (#46) ... 6b30ab6391

Closes #173 — final piece.

chore(ci): retrigger publish-workspace-server-image after ECR repo create (#173) ... 194cdf012b

Run #1010 (post-#46) succeeded all the way to push but failed with
"repository molecule-ai/platform does not exist" — the platform image
ECR repo had never been created (only platform-tenant existed).

Created the repo via:

    aws ecr create-repository --region us-east-2 \
      --repository-name molecule-ai/platform \
      --image-scanning-configuration scanOnPush=true

This is a one-line workflow comment to satisfy the path-filter and
re-run the publish workflow against the now-existing repo. Closes #173
properly this time — pre-clone + inline ECR auth + ECR repo all in
place.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

Merge pull request 'chore(ci): retrigger publish-workspace-server-image after ECR repo create (#173)' (#47) from chore/issue173-retrigger-after-ecr-repo-create into main 0276b295cc

chore: reconcile main → staging post-suspension divergence ... 25fb696965

Refs Task #165 (Class D AUTO_SYNC_TOKEN plumbing).

main and staging diverged after the 2026-05-06 GitHub-org suspension
because Class D / Class G / feature work landed on staging while
unrelated CI fixes (#34-47, ECR auth-inline, buildx→docker, pre-clone
manifest deps) landed straight on main. Both branches edited the
same workflow files, so every push to main triggered an Auto-sync
run that aborted at `git merge --no-ff origin/main` with 7 content
conflicts:

  - .github/workflows/canary-verify.yml      (URL: github.com → Gitea)
  - .github/workflows/ci.yml                 (3 URL refs)
  - .github/workflows/publish-runtime.yml    (cascade: HTTP repo-dispatch
                                              → Gitea push)
  - .github/workflows/publish-workspace-server-image.yml
                                             (drop AWS-action steps;
                                              ECR auth is inline)
  - .github/workflows/retarget-main-to-staging.yml (URL)
  - manifest.json                            (lowercase org slug + add
                                              mock-bigorg from main)
  - scripts/clone-manifest.sh                (keep main's MOLECULE_GITEA_TOKEN
                                              auth path + drop awk-tolower
                                              since manifest is now lowercase)

Resolution: union — staging's post-suspension Gitea/ECR migrations win
on URL/policy edits; main's additive work (mock-bigorg manifest entry,
inline ECR auth, MOLECULE_GITEA_TOKEN basic-auth) is preserved on top.

After this lands, staging is a strict superset of main, so the next
auto-sync run on a push to main will be a clean fast-forward / no-op.
The auto-sync workflow on main also picks up staging's AUTO_SYNC_TOKEN
swap (Class D #26) for free, fixing the latent layer-2 push-auth issue.

Verified locally:
  - bash -n scripts/clone-manifest.sh
  - python -c 'yaml.safe_load(...)' on each touched workflow
  - python -c 'json.load(open(manifest.json))' (21 plugins, 9 templates,
    7 org_templates)

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

Ghost approved these changes 2026-05-07 21:26:35 +00:00

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Reviewed: conflict resolutions are minimal + line-aligned with the diverged intents. URL/policy edits favor the post-suspension Gitea+ECR path; main-side additive changes (mock-bigorg, MOLECULE_GITEA_TOKEN auth, inline ECR auth) preserved on top. AUTO_SYNC_TOKEN scope unchanged. YAML+JSON+shell parsers all green locally. Approving the one-time reconciliation; the underlying auto-sync workflow path is unchanged so this is bounded-blast.

Reviewed: conflict resolutions are minimal + line-aligned with the diverged intents. URL/policy edits favor the post-suspension Gitea+ECR path; main-side additive changes (mock-bigorg, MOLECULE_GITEA_TOKEN auth, inline ECR auth) preserved on top. AUTO_SYNC_TOKEN scope unchanged. YAML+JSON+shell parsers all green locally. Approving the one-time reconciliation; the underlying auto-sync workflow path is unchanged so this is bounded-blast.

Ghost merged commit e3904ebb42 into staging 2026-05-07 21:26:42 +00:00

Ghost referenced this issue from a commit 2026-05-07 21:26:43 +00:00

chore: reconcile main → staging post-suspension divergence (Task #165 followup) (#48)

Ghost deleted branch chore/reconcile-main-staging-divergence 2026-05-07 21:26:43 +00:00

Ghost referenced this issue from a commit 2026-05-07 21:27:59 +00:00

chore: empty commit to trigger Auto-sync main→staging verification (Task #165)

Ghost referenced this pull request 2026-05-07 21:28:12 +00:00

chore: trigger Auto-sync verification (Task #165 followup, post-#48) #52

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Reference: molecule-ai/molecule-core#48

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