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docs: fix stale molecule-monorepo references (#1837) #1951

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devops-engineer merged 1 commits from fix/1837-docs-stale-monorepo-ref into main 2026-06-02 00:11:15 +00:00
Conversation 19 Commits 1 Files Changed 10
+27 -29
10 changed files with 27 additions and 29 deletions
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.env.example
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@@ -51,7 +51,7 @@ MOLECULE_ENV=development # Environment label (development/
# MOLECULE_IN_DOCKER= # Set when running the platform inside Docker (accepts 1/0, true/false). Triggers A2A proxy to rewrite 127.0.0.1:<port> agent URLs to Docker bridge hostnames. Auto-detected via /.dockerenv; only set if detection fails or to force off.
# GitHub
# GITHUB_REPO=owner/repo # Target repo for agent initial_prompt clone (e.g. Molecule-AI/molecule-monorepo). Read inside workspace containers.
# GITHUB_REPO=owner/repo # Target repo for agent initial_prompt clone (e.g. Molecule-AI/molecule-core). Read inside workspace containers.
# GITHUB_TOKEN= # Personal access token / installation token used by agents that clone private repos. Register as a global secret via POST /admin/secrets for propagation to workspace env. Token is used in-URL during clone and then scrubbed from .git/config via `git remote set-url`.
# Webhooks
README.md
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@@ -49,8 +49,8 @@
## Quick Start
```bash
git clone https://git.moleculesai.app/molecule-ai/molecule-monorepo.git
cd molecule-monorepo
git clone https://git.moleculesai.app/molecule-ai/molecule-core.git
cd molecule-core
./scripts/dev-start.sh
```
canvas/src/app/pricing/page.tsx
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@@ -41,7 +41,7 @@ export default function PricingPage() {
<p className="mt-2 text-ink-mid">
We publish the{" "}
<a
href="https://git.moleculesai.app/molecule-ai/molecule-monorepo"
href="https://git.moleculesai.app/molecule-ai/molecule-core"
className="text-accent underline hover:text-accent"
>
full source on GitHub
docs/architecture/molecule-technical-doc.md
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@@ -1,7 +1,7 @@
# Molecule AI — Comprehensive Technical Documentation
> Definitive technical reference for the Molecule AI Agent Team platform.
> Based on a full non-invasive scan of the [molecule-monorepo](https://git.moleculesai.app/molecule-ai/molecule-monorepo) repository.
> Based on a full non-invasive scan of the [molecule-core](https://git.moleculesai.app/molecule-ai/molecule-core) repository.
---
@@ -1131,11 +1131,11 @@ Molecule AI's workspace abstraction is **runtime-agnostic by design**. A workspa
## Links
- **GitHub**: https://git.moleculesai.app/molecule-ai/molecule-monorepo
- **Architecture Docs**: https://git.moleculesai.app/molecule-ai/molecule-monorepo/src/branch/main/docs/architecture
- **API Protocol**: https://git.moleculesai.app/molecule-ai/molecule-monorepo/src/branch/main/docs/api-protocol
- **Agent Runtime**: https://git.moleculesai.app/molecule-ai/molecule-monorepo/src/branch/main/docs/agent-runtime
- **Product Docs**: https://git.moleculesai.app/molecule-ai/molecule-monorepo/src/branch/main/docs/product
- **GitHub**: https://git.moleculesai.app/molecule-ai/molecule-core
- **Architecture Docs**: https://git.moleculesai.app/molecule-ai/molecule-core/src/branch/main/docs/architecture
- **API Protocol**: https://git.moleculesai.app/molecule-ai/molecule-core/src/branch/main/docs/api-protocol
- **Agent Runtime**: https://git.moleculesai.app/molecule-ai/molecule-core/src/branch/main/docs/agent-runtime
- **Product Docs**: https://git.moleculesai.app/molecule-ai/molecule-core/src/branch/main/docs/product
---
docs/development/local-development.md
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@@ -82,7 +82,7 @@ DATABASE_URL=postgres://dev:dev@postgres:5432/molecule?sslmode=prefer
REDIS_URL=redis://redis:6379
PORT=8080
SECRETS_ENCRYPTION_KEY=dev-key-change-in-production
WORKSPACE_DIR=/path/to/molecule-monorepo # Optional global fallback; prefer per-workspace workspace_dir in org.yaml or API
WORKSPACE_DIR=/path/to/molecule-core # Optional global fallback; prefer per-workspace workspace_dir in org.yaml or API
```
### Canvas (Next.js)
docs/infra/workspace-terminal.md
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@@ -16,11 +16,9 @@ workspace container running on it) over an [EC2 Instance Connect
Endpoint](https://docs.aws.amazon.com/AWSEC2/latest/UserGuide/ec2-instance-connect-setup-ec2-instance-connect-endpoint.html).
End users see a terminal; no direct public SSH ingress is required.
Tracking: originally `molecule-core#1528` (resolved 2026-04-22). The
`molecule-core` repo has since been renamed to `molecule-monorepo` and no
longer accepts new issues under the old name; future terminal work is
tracked in `molecule-monorepo` issues (workspace-server scope) and in
`molecule-controlplane` issues for the EIC / per-tenant SG path.
Tracking: originally `molecule-core#1528` (resolved 2026-04-22). Future
terminal work is tracked in `molecule-core` issues (workspace-server scope)
and in `molecule-controlplane` issues for the EIC / per-tenant SG path.
## Where things are
docs/integrations/opencode.md
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@@ -64,7 +64,7 @@ When opencode connects to the Molecule MCP endpoint, the agent gains access to:
"tool": "delegate_task",
"arguments": {
"target": "research-lead",
"task": "Summarise the last 7 days of commits in Molecule-AI/molecule-monorepo"
"task": "Summarise the last 7 days of commits in Molecule-AI/molecule-core"
}
}
```
docs/internal-content-policy.md
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@@ -1,6 +1,6 @@
# Internal content policy
The `Molecule-AI/molecule-monorepo` repo is **public**. Anything internal
The `Molecule-AI/molecule-core` repo is **public**. Anything internal
(positioning, competitive briefs, sales playbooks, PMM/press drip, draft
campaigns, raw research notes, ops runbooks, retrospectives) lives in
**`Molecule-AI/internal`**.
@@ -18,14 +18,14 @@ This page is the canonical decision tree.
| Draft campaign asset (still iterating, not yet customer-visible) | `Molecule-AI/internal/marketing/campaigns/` |
| Roadmap discussion, planning doc, retrospective | `Molecule-AI/internal/PLAN.md` or `Molecule-AI/internal/retrospectives/` |
| Runbook, ops procedure, incident postmortem | `Molecule-AI/internal/runbooks/` |
| **Public-ready** blog post (final draft, ready to ship to docs site) | `Molecule-AI/molecule-monorepo/docs/blog/` |
| **Public-ready** tutorial / quickstart | `Molecule-AI/molecule-monorepo/docs/tutorials/` |
| Public DevRel content (code samples, demos for users) | `Molecule-AI/molecule-monorepo/docs/devrel/` |
| API reference, architecture docs for external developers | `Molecule-AI/molecule-monorepo/docs/api/` |
| **Public-ready** blog post (final draft, ready to ship to docs site) | `Molecule-AI/molecule-core/docs/blog/` |
| **Public-ready** tutorial / quickstart | `Molecule-AI/molecule-core/docs/tutorials/` |
| Public DevRel content (code samples, demos for users) | `Molecule-AI/molecule-core/docs/devrel/` |
| API reference, architecture docs for external developers | `Molecule-AI/molecule-core/docs/api/` |
| Code, tests, infrastructure | wherever is appropriate inside this repo |
**Rule of thumb:** *"Would I be comfortable if a competitor / journalist / customer
read this verbatim today?"* — yes → `monorepo/docs/`. No / not yet → `internal/`.
read this verbatim today?"* — yes → `molecule-core/docs/`. No / not yet → `internal/`.
## Why
@@ -82,7 +82,7 @@ git push -u origin HEAD
gh pr create --base main --fill
```
Yes, this is more steps than `cd molecule-monorepo && git add research/foo.md`.
Yes, this is more steps than `cd molecule-core && git add research/foo.md`.
That cost is intentional: the friction is the point. Public space and
internal space are different products with different audiences and
different durability guarantees.
docs/quickstart.md
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@@ -17,8 +17,8 @@ This path is aligned to the current repository and current UI. It gets you from
## The one-command path
```bash
git clone https://git.moleculesai.app/molecule-ai/molecule-monorepo.git
cd molecule-monorepo
git clone https://git.moleculesai.app/molecule-ai/molecule-core.git
cd molecule-core
./scripts/dev-start.sh
```
@@ -42,8 +42,8 @@ If you'd rather run each component yourself — useful when you're iterating on
### Step 1: Clone the repository
```bash
git clone https://git.moleculesai.app/molecule-ai/molecule-monorepo.git
cd molecule-monorepo
git clone https://git.moleculesai.app/molecule-ai/molecule-core.git
cd molecule-core
```
### Step 2: Start the shared infrastructure
tools/check-template-parity.sh
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@@ -13,7 +13,7 @@
#
# Invocation (from template-hermes repo's CI):
#
# bash /path/to/molecule-monorepo/tools/check-template-parity.sh \
# bash /path/to/molecule-core/tools/check-template-parity.sh \
# install.sh start.sh
#
# Or inline via curl: