CI fully green. Dev Lead review: ✅ Approved. Docs-only: adds Gemini CLI and open-multi-agent entries to ecosystem-watch.md; files issues #332 (gemini-cli adapter) and #333 (PM goal-decomp skill).
Extends the secret map with RESEND_API_KEY, RESEND_FROM_EMAIL,
STRIPE_API_KEY, STRIPE_WEBHOOK_SECRET — the four SaaS secrets the
control plane reads once the current PR stack (#29-#34 on
molecule-controlplane) ships.
Adds rotation procedures for each:
- Resend: low-blast-radius, best-effort sends, domain verification
gotcha documented
- Stripe API key: independent rotation from webhook secret, live verify
via /cp/billing/checkout
- Stripe webhook secret: 24h overlap window procedure using stripe
trigger for live verify
Also adds Resend + Stripe entries to the emergency-contacts list.
Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
Documents the 4-step hard-delete cascade implemented in
molecule-controlplane PR #29 (Stripe → Redis → Infra → DB rows),
how to read the org_purges audit table when a purge fails, the 30-day
GDPR deadline, and what the cascade deliberately does NOT cover
(WorkOS users, LLM provider history, Langfuse traces).
Cross-referenced from the "SaaS ops" block in CLAUDE.md so future
agents find it when handling erasure requests.
Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
Captures ~27 PRs merged across both repos this session: security
hardening cluster (#94/#99/#106/#110/#119/#162/#155/#167/#185/#200/#203/
#209/#233), data-integrity fixes (#212/#224/#236), CI runner migration
(#186), platform/scheduler reliability (#95/#149/#207/#206), workspace
runtime features (#205/#208/#198/#216/#225/#235/#231), code-review
follow-ups (#228/#232).
Updated counts: 816 Go (+70), 1180 Python (+40), 453 vitest (unchanged
— UI/a11y patches), 97 jest (unchanged).
CLAUDE.md additions:
- Idle Loop section (#205) under Architectural Patterns
- Admin auth middleware variants section linking docs/runbooks/admin-auth.md
- Migration runner section explaining the .down.sql filter (#212)
- Per-route auth notes in the API table (PATCH field-whitelist, CanvasOrBearer
on PUT /canvas/viewport, AdminAuth on bundles/events/templates-import/
approvals-pending/admin-liveness)
- Database section updated with workspace_auth_tokens auto-revoke (#110),
scheduler.error_detail surfacing (#206), workspace_schedules.last_status
'skipped' state (#207)
PLAN.md additions:
- New Recently launched (overnight sweep) section with full PR/issue index
- Phase status updated (B–G now complete, H partial)
- Live infrastructure deltas (migration fix, token rotation, legal pages)
- Outstanding items consolidated
Edit-history file expanded from the tick-9 stub to a full session record
covering malware cleanup, CI runner migration, security cluster, data
integrity, infra/feature/code-review batches, and outstanding user
actions.
Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
Addresses items 4, 5, 7 from the self-review of the batch merge. PR A
(#228) covered items 1, 2, 3, 6 on the Go side.
## workspace-template/main.py — idle loop hardening
- Replace asyncio.get_event_loop() with asyncio.get_running_loop() —
the former is deprecated in 3.12+ and emits a DeprecationWarning on
every idle fire.
- Replace hardcoded urlopen timeout=600 with IDLE_FIRE_TIMEOUT_SECONDS
clamped to max(60, min(300, idle_interval_seconds)). Long cadence
workspaces no longer hold dangling requests open for 10 minutes; the
cap adapts automatically when the interval is short.
- Type the exception handling: split HTTPError (has .code) from URLError
(connection-level) from the generic catch-all. Log status + error
class separately so operators can grep for specific failure modes
instead of a bare "post failed".
- Fire-and-forget no longer loses exceptions. run_in_executor Future
now has an add_done_callback that logs the outcome, so a panic in
_post_sync surfaces as "Idle loop: post failed — status=None err=..."
instead of Python's default "Task exception was never retrieved"
warning burried in stderr.
## org-templates/molecule-dev/org.yaml — discoverability
Added idle_prompt + idle_interval_seconds to the defaults: block with
explanatory comments. Without this, users had to read main.py to
discover the feature.
## docs/runbooks/admin-auth.md — new
Documents the three middleware variants (AdminAuth strict,
CanvasOrBearer soft, WorkspaceAuth per-id), the exact contract of each,
and the three-question test for adding a new route to CanvasOrBearer.
Also flags the session-cookie follow-up as Phase H.
Referenced PRs: #138, #164, #165, #166, #167, #168, #190, #194, #203,
#228.
No code deltas in platform/ beyond the Python + YAML + docs changes.
Full pytest suite unchanged except the pre-existing test_hermes_smoke
flake that fails in full-suite but passes in isolation (test isolation
bug, not introduced by this PR).
Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
Two new entries added from the second daily pass (first run merged as PR #150
at 03:20 UTC). Both surfaced in the afternoon trending windows and were not
covered by the morning run.
- microsoft/agent-framework (~9.5k ⭐): official Microsoft successor to
AutoGen; ships migration guide and April 2026 .NET release. Directly affects
our autogen adapter in workspace-template/adapters/. Filed issue #156 to
evaluate adapter update.
- vercel-labs/open-agents (~2.2k ⭐, +1,020 today): cloud coding agent template
from Vercel Labs (same team as Skills CLI). Notable for agent-outside-sandbox
architecture and snapshot-based VM resumption — a more efficient approach
than our current Docker restart + git-clone pattern.
Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
Addresses PR #82 code review: 🟡×3 + 🔵×5.
- Fly registry login username: 'x' → 'molecule-ai' + explanatory comment.
- Build & push split into two steps (GHCR / Fly registry) so a single-
registry outage can't fail the other. Second step uses 'if: always()'
to ensure Fly mirror runs even if GHCR push flakes.
- docs/runbooks/saas-secrets.md: full secret map + rotation procedures
for every SaaS credential, with danger-case callouts. Documents the
coupled FLY_API_TOKEN (lives in GHA secret AND fly secrets — must be
rotated in both).
- CLAUDE.md: new 'SaaS ops' section linking to the runbook.
- docs/edit-history/2026-04-14.md — append tick-5 section covering PR #69
(PLAN.md backlog stale-ref cleanup) and PR #70 (wire 12 modular plugins
from PR #63 into the default molecule-dev org template; defaults 3 → 9
plus PM + Security Auditor role extras).
- PLAN.md — add tick-5 entries under "Recently launched" noting PR #70
activated the tick-4 plugins and PR #69 cleaned up stale backlog refs.
Both merges are docs/template-only. No code surface moved, no new env
vars, no test-count drift. CLAUDE.md, .env.example, README.md, and
README.zh-CN.md unchanged.
Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
- edit-history/2026-04-14.md: append tick-4 section covering the 12
modular guardrail plugins (#63), global-secrets auto-restart fan-out
(#64, fixes issue #15), and synthetic restart-context A2A message
(#65, fixes issue #19 Layer 1; Layer 2 deferred to issue #66).
- CLAUDE.md: bump Go test count 699 -> 726 (measured); note global
secrets auto-restart on SetGlobal/DeleteGlobal in the route table;
add Workspace Lifecycle paragraph for the restart-context message
and its system:restart-context caller prefix.
- PLAN.md: bump Go test count in the coverage table; record issues
#15 and #19 Layer 1 as launched; add new Backlog entry for the
Layer 2 follow-up (issue #66).
Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
- docs/edit-history/2026-04-14.md: append tick-3 section covering the
admin test-token route (#53), the prior-tick doc-sync PR (#54), and
the hermes required_env alignment (#55). Record measured test counts
(Go +4 for the TestAdminTestToken_* quartet).
- CLAUDE.md: bump Go test count 695 → 699 with a note pointing at the
new quartet. Route-table row and env-var mentions for the admin
route already landed with #53; verified on main.
- .env.example: add MOLECULE_ENABLE_TEST_TOKENS with a comment about
the prod-hidden default. Closes the code-review doc-sync flag from
#53 (var was in CLAUDE.md but missing from .env.example).
No PLAN.md / README.md / README.zh-CN.md update needed — none of the
three merges expose a user-visible surface.
Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
- Delete empty platform/plugins/ (dead remnant; plugins/ at repo root is
the real registry; router.go comment updated)
- Gitignore local dev cruft: platform/workspace-configs-templates/,
.agents/ (codex/gemini skill cache), backups/
- Untrack .agents/skills/ (keep local, stop tracking)
- Move examples/remote-agent/ → sdk/python/examples/remote-agent/
(co-locate with the SDK it exercises); update refs in
molecule_agent README + __init__ + PLAN.md + the demo's own README
- Move docs/superpowers/plans/ → plugins/superpowers/plans/
(plans were written by the superpowers plugin's writing-plans
subskill; belong with the plugin, not under docs)
- Add tests/README.md explaining the unit-tests-per-package +
root-E2E split so new contributors don't ask
- Add docs/README.md explaining why site tooling lives under docs/
rather than a separate docs-site/ (VitePress ergonomics)
Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
Swap in the new molecular-graph icon across canvas favicon, in-app logo,
and README branding paths. Add HANDOFF.md as the cross-session context
doc carried over from the Starfire→Molecule AI migration. Fix stale
"Starfire" reference in the pre-commit hook header.
Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
