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Per documentation-specialist's grep agent (2026-05-07T07:30, see internal#46): runtime-breaking ghcr.io references in shell scripts + docker-compose + the slip-past-workflow lint_secret_pattern_drift.py all need migration. These were missed by security-auditor's workflow-only audit. Files (6): - .github/scripts/lint_secret_pattern_drift.py:40 — workspace-runtime pre-commit-checks.sh consumer URL: raw.githubusercontent.com → Gitea raw URL (https://git.moleculesai.app/molecule-ai/.../raw/ branch/main/...). The lint job runs in CI and would 404 today. - scripts/refresh-workspace-images.sh:54 — workspace-template image pull URL: ghcr.io → ECR (153263036946.dkr.ecr.us-east-2.amazonaws.com). - scripts/rollback-latest.sh — full rewrite of header + auth flow: * ghcr.io/molecule-ai/{platform,platform-tenant} → ECR * GITHUB_TOKEN with write:packages → AWS ECR auth (aws ecr get-login-password). Per saved memory reference_post_suspension_pipeline, prod cutover is to ECR. * Updated header docs to match new auth flow + prereqs. - scripts/demo-freeze.sh:13,17 — comment-only ghcr → ECR (the script doesn't currently exec these URLs, but the comments describe the cascade and need to match reality). - docker-compose.yml:215-216 — canvas image: ghcr.io → ECR + updated the auth comment to describe `aws ecr get-login-password` flow. - tools/check-template-parity.sh:21 — inline curl install instructions: raw.githubusercontent.com → Gitea raw URL. Hostile self-review: 1. rollback-latest.sh's GITHUB_TOKEN→aws-cli auth swap is a behavior change. Operators using this script now need aws CLI authenticated for region us-east-2 with ECR pull/push perms. Documented in updated header. Operators who don't have aws CLI will get 'aws: command not installed' which is a clear failure mode (not silent). 2. The Gitea raw URL shape (/raw/branch/main/) differs from GitHub's raw.githubusercontent.com structure. Verified pattern by inspecting other Gitea raw URLs in the codebase. If Gitea's URL changes (1.23+), update via the same one-line edit. 3. Doesn't touch packer/scripts/install-base.sh which has a similar ghcr.io ref per the grep agent's findings — that's bigger-scope (packer build pipeline) and lives in molecule-controlplane-ish territory; filing as parked follow-up under #46 if not already. Refs: molecule-ai/internal#46, molecule-ai/internal#37, molecule-ai/internal#38, saved memory reference_post_suspension_pipeline |
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|---|---|---|
| .. | ||
| demo-freeze-snapshots | ||
| ops | ||
| build_runtime_package.py | ||
| build-images.sh | ||
| bundle-compile.sh | ||
| canary-smoke.sh | ||
| check-cascade-list-vs-manifest.sh | ||
| check-stale-promote-pr.sh | ||
| cleanup-rogue-workspaces.sh | ||
| clone-manifest.sh | ||
| demo-day-runbook.md | ||
| demo-freeze.sh | ||
| demo-thaw.sh | ||
| dev-start.sh | ||
| import-agent.sh | ||
| lockdown-tenant-sg.sh | ||
| measure-coordinator-task-bounds-runner.sh | ||
| measure-coordinator-task-bounds.sh | ||
| nuke-and-rebuild.sh | ||
| post-rebuild-setup.sh | ||
| README.md | ||
| refresh-workspace-images.sh | ||
| rollback-latest.sh | ||
| test_build_runtime_package.py | ||
| test-a2a-cross-runtime.sh | ||
| test-all-adapters.sh | ||
| test-all-runtimes-a2a-e2e.sh | ||
| test-all.sh | ||
| test-check-stale-promote-pr.sh | ||
| test-cross-agent-chat.sh | ||
| test-hermes-plugin-e2e.sh | ||
| test-nuke-and-rebuild.sh | ||
| test-team-e2e.sh | ||
| wheel_smoke.py | ||
scripts/
Operational and one-off scripts for molecule-core. Most are self-documenting — see the header comments in each file.
RFC #2251 coordinator task-bound harnesses
There are three related scripts; pick the right one:
| Script | Purpose | Targets |
|---|---|---|
measure-coordinator-task-bounds.sh |
Canonical v1 harness for the RFC #2251 / Issue 4 reproduction. Provisions a PM coordinator + Researcher child via claude-code-default + langgraph templates, sends a synthesis-heavy A2A kickoff, observes elapsed time + activity trace. |
OSS-shape platform — localhost or any /workspaces-shaped endpoint. Has tenant/admin-token guards for non-localhost runs. |
measure-coordinator-task-bounds-runner.sh |
Generalised runner for the same measurement contract but with arbitrary template + secret + model combinations (Hermes/MiniMax, etc.). Useful for cross-runtime variants without modifying the canonical harness. | Same as above (local or SaaS via MODE=saas). |
measure-coordinator-task-bounds.sh (in molecule-controlplane) |
Production-shape variant that bootstraps a real staging tenant via POST /cp/admin/orgs, then runs the same measurement against <slug>.staging.moleculesai.app. |
Staging controlplane only — refuses to run against production. |
See reference_harness_pair_pattern (auto-memory) for when to use which
and the cross-repo design rationale.
Common safety pattern across all three
- Cleanup trap on EXIT/INT/TERM auto-deletes provisioned resources.
DRY_RUN=1prints plan + auth fingerprint, exits before any state mutation. Run this before pointing at staging or any shared infrastructure.- Non-target guard refuses arbitrary endpoints (the controlplane
variant is locked to
staging-api.moleculesai.app; the OSS variant requires explicit auth + tenant scoping for non-localhost PLATFORM). - Cleanup failures emit
cleanup_*_failedevents with remediation hints; no silenced curl. ADMIN_TOKEN expiring mid-run surfaces as a structured event rather than a silent leak.
Activity trace caveat
If activity_trace.raw == "<endpoint_unavailable>", the per-workspace
/activity endpoint isn't wired on the target build — the bound
measurement is INCONCLUSIVE on the platform-ceiling question. Either
wire the endpoint or replace with the equivalent Datadog query. Note
that /activity accepts a since_secs query parameter; see the
endpoint handler for the supported range.
Other scripts
cleanup-rogue-workspaces.sh— emergency teardown for leaked workspaces. Prompts for confirmation. Pair with the harnesses if a cleanup trap fails (seecleanup_*_failedevents).canary-smoke.sh— quick smoke test for canary releases.dev-start.sh— local-dev platform bring-up.
The rest are self-documenting in their header comments.