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4766 Commits

Author SHA1 Message Date
11afd25e6a chore: retrigger Harness Replays after Class G + clone-manifest fixes (#168)
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Empty-shape commit on a tests/harness/** path to trigger the harness-replays
workflow's path-filter on staging, verifying that:
- PR #40 (Class G #168) migrated all explicit github.com/Molecule-AI URL refs
- PR #42 (Class G #168 followup) migrated the indirect clone-manifest.sh + manifest.json forms

After this run, harness-replays should get past the previously-failing
'fatal: could not read Username for https://github.com' clone-manifest step.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-07 13:36:39 -07:00
0b840df563 fix(ci): use docker driver for buildx + drop type=gha cache (#43)
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Closes #173 — third and final piece. Pairs with #38 and #41.
2026-05-07 20:36:01 +00:00
0bb8daf25c Merge pull request 'fix(post-suspension): redirect clone-manifest to Gitea (Class G #168 followup)' (#42) from fix/post-suspension-clone-manifest into staging
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2026-05-07 20:35:54 +00:00
devops-engineer
bee4f9ea79 fix(ci): use docker driver for buildx + drop type=gha cache (followup #173)
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PR #38 + #41 fixed the Dockerfile-side clone issue. CI run #893 then
revealed two Gitea-Actions-specific issues with the unchanged buildx
config:

1. `failed to push: 401 Unauthorized` to ECR. Root cause: default
   buildx driver `docker-container` spawns a buildkit container that
   doesn't share the host's `~/.docker/config.json`, so the ECR auth
   set up by amazon-ecr-login doesn't reach the push. Fix: pin
   `driver: docker` so buildx delegates to the host daemon, which
   already has the ECR creds.

2. `dial tcp ...:41939: i/o timeout` on `_apis/artifactcache/cache`.
   Root cause: `cache-from/cache-to: type=gha` is GitHub-specific;
   Gitea Actions has no compatible artifact-cache backend, so every
   cache lookup fails after a 30s timeout. Fix: remove the cache-*
   options. Cold-build cost is <10min for 37-repo clone + Go/Node
   compile, acceptable. Could revisit with type=registry inline cache
   later if rebuilds get painful.

With this + #38/#41, the workflow should run end-to-end on Gitea
Actions: pre-clone -> docker build (host daemon) -> ECR push.

Closes #173 (third and final piece).

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-07 13:35:07 -07:00
990b4d2eb8 fix(post-suspension): redirect clone-manifest to Gitea (Class G #168 followup)
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The Class G #168 PR (#40) caught explicit `github.com/Molecule-AI/<repo>`
URL literals in 23 files but missed two indirect forms:

- `scripts/clone-manifest.sh` lines 50,52 had
  `https://github.com/${repo}.git` (the org/repo path is a variable, so the
  Class-G regex `github\.com/Molecule-AI/` didn't match).
- `manifest.json` had `"Molecule-AI/<repo>"` (no `github.com` prefix; the
  prefix gets prepended by the script).

Together these are what `Dockerfile.tenant`'s stage-3 templates RUN
actually fetches. After PR #40 the harness-replays workflow against
staging still fails with `fatal: could not read Username for
'https://github.com'` because the in-image build is the unfixed shell
loop.

This PR:
- scripts/clone-manifest.sh: replaces both clone URLs with
  `https://git.moleculesai.app/${repo}.git`. Anonymous public clones
  work for these repos (verified manually).
- manifest.json: lowercases `Molecule-AI/` to `molecule-ai/` to match
  Gitea's canonical org slug. Gitea is case-insensitive so both work,
  but the lowercase form matches every other URL in the org and is
  what main's clone-manifest.sh (PR #38) already standardises on.

This is the minimum-diff staging fix. Sister #173 already shipped a
more sophisticated version on main (with optional MOLECULE_GITEA_TOKEN
auth + per-build pre-clone). When auto-sync resolves the staging-vs-main
conflict, this minimal version gets superseded by the main version
naturally.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-07 13:34:53 -07:00
c1e32ff4a7 Merge pull request 'fix(test): drain coalesceRestart goroutines before t.Cleanup (Class H, #170)' (#39) from fix/170-goroutine-bleed-test-isolation into main
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2026-05-07 20:27:08 +00:00
bac04dc278 fix(ci): apply pre-clone fix to platform Dockerfile too (#41)
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Closes #173 — followup to #38.
2026-05-07 20:23:33 +00:00
04025189a6 Merge pull request 'fix(post-suspension): migrate github.com/Molecule-AI refs to git.moleculesai.app (Class G #168)' (#40) from fix/post-suspension-github-urls into staging
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2026-05-07 20:14:02 +00:00
devops-engineer
e16d7eaa08 fix(ci): apply pre-clone fix to platform Dockerfile too (followup #173)
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The first PR (#38) only patched Dockerfile.tenant — but the workflow
also builds the platform image from workspace-server/Dockerfile, which
had the SAME in-image `git clone` stage. Build run #794 caught this:
"process clone-manifest.sh ... exit code 128" on the platform image.

Apply the same pre-clone shape to the platform Dockerfile: drop the
`templates` stage, COPY from .tenant-bundle-deps/ instead. The
workflow's existing "Pre-clone manifest deps" step (added in #38)
already populates .tenant-bundle-deps/ before either build runs, so no
workflow change needed.

Self-review note: the missed-platform-Dockerfile is a Phase 1 quality
miss — I read both files but only registered the tenant one as
in-scope. Saved memory `feedback_orchestrator_must_verify_before_declaring_fixed`
applies: should have grepped the whole workspace-server/ for "templates"
stages before claiming Task #173 done. CI run #794 caught it within
~6 minutes; net cost: one followup commit.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-07 13:13:13 -07:00
Hongming Wang
17f1f30b3f fix(test): drain coalesceRestart goroutines before t.Cleanup (Class H, #170)
TestPooledWithEICTunnel_PreservesFnErr (and any sqlmock-using neighbour
test) was at risk of inheriting stale INSERT calls from a previous
test's coalesceRestart goroutine that survived its t.Cleanup boundary.

The production callsite shape is `go h.RestartByID(...)` from
a2a_proxy.go, a2a_proxy_helpers.go and main.go. When that goroutine's
runRestartCycle panics, coalesceRestart's deferred recover swallows it
to keep the platform process alive — but in tests, nothing waits for
the goroutine to fully exit. If it's still draining LogActivity-shaped
work after the test returns, those INSERTs land in the next test's
sqlmock connection as kind=DELEGATION_FAILED /
kind=WORKSPACE_PROVISION_FAILED, surfacing as "INSERT-not-expected".

Fix: introduce drainCoalesceGoroutine(t, wsID, cycle) test helper that
spawns coalesceRestart on a goroutine (matching production) and
registers a t.Cleanup with sync.WaitGroup.Wait so the test can't
declare itself done while a goroutine is still alive.

Convert TestCoalesceRestart_PanicInCycleClearsState to use the helper
(previously it called coalesceRestart synchronously, which never
exercised the production goroutine-survival contract).

Add TestCoalesceRestart_DrainHelperWaitsForGoroutineExit as the
regression guard: cycle blocks 150ms then panics; the test asserts
t.Run elapsed >= 150ms (proving the Wait barrier engaged) AND the
deferred close ran (proving the panic-recovery defer chain executed)
AND state.running was cleared. Verified the assertion is real by
mutation-testing: removing t.Cleanup(wg.Wait) makes this test FAIL
deterministically with elapsed <300µs.

Per saved memory feedback_assert_exact_not_substring: the regression
test asserts an exact-shape contract (elapsed >= blockFor) rather than
a substring-in-output, so it discriminates between "drain works" and
"drain skipped".

Per Phase 3: 10/10 race-detector runs pass for all TestCoalesceRestart_*
tests. Full ./internal/handlers/... suite green.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-07 13:13:13 -07:00
55689e0b10 fix(post-suspension): migrate github.com/Molecule-AI refs to git.moleculesai.app (Class G #168)
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The GitHub org Molecule-AI was suspended on 2026-05-06; canonical SCM
is now Gitea at https://git.moleculesai.app/molecule-ai/. Stale
github.com/Molecule-AI/... URLs return 404 and break tooling that
clones / pip-installs / curls them.

This bundles all non-Go-module URL fixes for this repo into a single PR.
Go module path references (in *.go, go.mod, go.sum) are out of scope
here -- tracked separately under Task #140.

Token-auth clone URLs also flip ${GITHUB_TOKEN} -> ${GITEA_TOKEN} since
the GitHub token does not auth against Gitea.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-07 13:08:15 -07:00
Hongming Wang
694c05552b fix(test): drain coalesceRestart goroutines before t.Cleanup (Class H, #170)
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TestPooledWithEICTunnel_PreservesFnErr (and any sqlmock-using neighbour
test) was at risk of inheriting stale INSERT calls from a previous
test's coalesceRestart goroutine that survived its t.Cleanup boundary.

The production callsite shape is `go h.RestartByID(...)` from
a2a_proxy.go, a2a_proxy_helpers.go and main.go. When that goroutine's
runRestartCycle panics, coalesceRestart's deferred recover swallows it
to keep the platform process alive — but in tests, nothing waits for
the goroutine to fully exit. If it's still draining LogActivity-shaped
work after the test returns, those INSERTs land in the next test's
sqlmock connection as kind=DELEGATION_FAILED /
kind=WORKSPACE_PROVISION_FAILED, surfacing as "INSERT-not-expected".

Fix: introduce drainCoalesceGoroutine(t, wsID, cycle) test helper that
spawns coalesceRestart on a goroutine (matching production) and
registers a t.Cleanup with sync.WaitGroup.Wait so the test can't
declare itself done while a goroutine is still alive.

Convert TestCoalesceRestart_PanicInCycleClearsState to use the helper
(previously it called coalesceRestart synchronously, which never
exercised the production goroutine-survival contract).

Add TestCoalesceRestart_DrainHelperWaitsForGoroutineExit as the
regression guard: cycle blocks 150ms then panics; the test asserts
t.Run elapsed >= 150ms (proving the Wait barrier engaged) AND the
deferred close ran (proving the panic-recovery defer chain executed)
AND state.running was cleared. Verified the assertion is real by
mutation-testing: removing t.Cleanup(wg.Wait) makes this test FAIL
deterministically with elapsed <300µs.

Per saved memory feedback_assert_exact_not_substring: the regression
test asserts an exact-shape contract (elapsed >= blockFor) rather than
a substring-in-output, so it discriminates between "drain works" and
"drain skipped".

Per Phase 3: 10/10 race-detector runs pass for all TestCoalesceRestart_*
tests. Full ./internal/handlers/... suite green.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-07 13:04:57 -07:00
948b5a0d89 fix(ci): pre-clone manifest deps in workflow, drop in-image clone (#38)
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Closes #173. Verified locally with persona PAT (37/37 repos cloned).
2026-05-07 20:01:06 +00:00
devops-engineer
a6d67b4c68 fix(ci): pre-clone manifest deps in workflow, drop in-image clone (closes #173)
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publish-workspace-server-image.yml could not run on Gitea Actions because
Dockerfile.tenant's stage 3 ran `git clone` against private Gitea repos
from inside the Docker build context, where no auth path exists. Every
workspace-server rebuild required a manual operator-host push.

Move cloning to the trusted CI context (where AUTO_SYNC_TOKEN — the
devops-engineer persona PAT — is naturally available). Dockerfile.tenant
now COPYs from .tenant-bundle-deps/, populated by the workflow's new
"Pre-clone manifest deps" step. The Gitea token never enters the image.

- scripts/clone-manifest.sh: optional MOLECULE_GITEA_TOKEN env embeds
  basic-auth in the clone URL; redacted in log output. Anonymous fallback
  preserved for future public-repo path.
- .github/workflows/publish-workspace-server-image.yml: new pre-clone
  step before docker build; injects AUTO_SYNC_TOKEN. Fail-fast if the
  secret is empty.
- workspace-server/Dockerfile.tenant: drop stage 3 (templates), COPY
  from .tenant-bundle-deps/ instead. Header documents the prereq.
- .gitignore: ignore /.tenant-bundle-deps/ so a local build can't
  accidentally commit cloned repos.

Verified locally: clone-manifest.sh with the devops-engineer persona
token cloned all 37 repos (9 ws + 7 org + 21 plugins, 4.9MB after
.git strip).

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-07 12:59:46 -07:00
d2da0c8d34 Merge pull request 'fix(workspace-server): a2a-proxy preflight container check (closes #36)' (#37) from fix/issue36-a2a-proxy-preflight into main
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2026-05-07 18:25:07 +00:00
be5fbb5ad3 fix(workspace-server): a2a-proxy preflight container check (closes #36)
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Same SSOT-divergence shape as #10 / fixed in #12, but on the a2a-proxy
code path. The plugin handler was routed through `provisioner.RunningContainerName`;
a2a-proxy was forwarding optimistically and only catching missing containers
REACTIVELY via `maybeMarkContainerDead` after the network call timed out.

Result on tenants whose agent containers had been recycled (e.g. post-EC2
replace from molecule-controlplane#20): canvas waits 2-30s for the network
forward to fail before getting a 503, and the workspace-server logs only
"ProxyA2A forward error" without the "container is dead" signal.

This PR adds a proactive `Provisioner.IsRunning` check in `proxyA2ARequest`
between `resolveAgentURL` and `dispatchA2A`, gated on the conditions where
we know we're talking to a sibling Docker container we own (`h.provisioner
!= nil` AND `platformInDocker` AND the URL was rewritten to Docker-DNS form).

Three outcomes via the SSOT helper:
  (true,  nil) → forward as today
  (false, nil) → fast-503 with `error="workspace container not running —
                 restart triggered"`, `restarting=true`, `preflight=true`,
                 plus the same offline-flip + WORKSPACE_OFFLINE broadcast +
                 async restart that `maybeMarkContainerDead` produces
  (true,  err) → fall through to optimistic forward (matches IsRunning's
                 "fail-soft as alive" contract — flaky daemon must not
                 trigger a restart cascade)

The `preflight=true` flag in the response distinguishes the proactive
short-circuit from the reactive `maybeMarkContainerDead` path so canvas
or downstream callers can render distinct messages later.

* `internal/handlers/a2a_proxy.go` — preflight call site between
  resolveAgentURL and dispatchA2A; gated on `h.provisioner != nil &&
  platformInDocker && url == http://<ContainerName(id)>:port`.
* `internal/handlers/a2a_proxy_helpers.go` — `preflightContainerHealth`
  helper. Routes through `h.provisioner.IsRunning` (which itself wraps
  `RunningContainerName`). Identical offline-flip side-effects as
  `maybeMarkContainerDead` for the dead-container case.
* `internal/handlers/a2a_proxy_preflight_test.go` — 4 tests: running →
  nil; not-running → structured 503 + sqlmock expectations on the
  offline-flip + structure_events insert; transient error → nil
  (fail-soft); AST gate pinning the SSOT routing (mirror of #12's gate).

Mutation-tested: removing the `if running { return nil }` guard makes
the production code fail to compile (unused var). A subtler mutation
(replacing the !running branch with `return nil`) would make
TestPreflight_ContainerNotRunning_StructuredFastFail fail at runtime
with sqlmock's "expected DB call did not occur."

Refs: molecule-core#36. Companion to #12 (issue #10).

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-07 11:15:08 -07:00
b9ca4ad84a Merge pull request 'fix(ci): mark CodeQL continue-on-error (advisory only) — closes #156' (#35) from fix/codeql-continue-on-error-156 into main
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2026-05-07 17:26:59 +00:00
b73d3bfff2 fix(ci): mark CodeQL continue-on-error (advisory only) — closes #156
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2026-05-07 17:26:52 +00:00
b191c2a796 Merge pull request 'fix(ci): use AUTO_SYNC_TOKEN for auto-sync main->staging (Class D)' (#26) from fix/auto-sync-use-devops-token into staging
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2026-05-07 17:25:44 +00:00
51ea86e3ec feat: mock runtime + mock-bigorg 200-workspace org (#34)
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Demo Mock #3 — see PR for details. Admin-merged, CI skipped per Hongming directive.
2026-05-07 15:41:06 +00:00
Hongming Wang
d64641904f feat(workspace-server): mock runtime + mock-bigorg org template
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Adds a 'mock' runtime: virtual workspaces with no container, no EC2,
no LLM. Every A2A reply is synthesised from a small canned-variant
pool ('On it!', 'Got it, on it now.', etc.) deterministically seeded
by (workspace_id, request_id).

Built for funding-demo "200-workspace mock org" — renders an
enterprise-scale org chart on the canvas (CEO/VPs/Managers/ICs)
without burning real LLM credits or provisioning 200 EC2 instances.

Surfaces:
  - workspace-server/internal/handlers/mock_runtime.go: A2A proxy
    short-circuit, canned-reply pool, deterministic variant pick.
  - workspace-server/internal/handlers/a2a_proxy.go: gate the
    short-circuit before resolveAgentURL (mock has no URL).
  - workspace-server/internal/handlers/org_import.go: skip Docker
    provisioning for mock workspaces, set status='online' directly,
    drop the per-sibling 2s pacing for mock children (collapses
    a 200-workspace import from ~7min → ~1s).
  - workspace-server/internal/handlers/runtime_registry.go: register
    'mock' in the runtime allowlist (manifest + fallback set).
  - workspace-server/internal/registry/healthsweep.go +
    orphan_sweeper.go: skip mock workspaces in container-health and
    stale-token sweeps (no container by design).
  - workspace-server/internal/handlers/workspace_restart.go: mirror
    the 'external' Restart no-op for mock.
  - manifest.json: register the new
    Molecule-AI/molecule-ai-org-template-mock-bigorg repo.

Tests: 5 new in mock_runtime_test.go covering happy-path, non-mock
regression guard, determinism, IsMockRuntime trim/case, JSON-RPC
id echo. All existing handler + registry tests still pass.

Local-verified: imported the 200-workspace template against a fresh
postgres+redis, confirmed all 200 land in 'online' and stay there
through the 30s health-sweep window, exercised A2A on CEO + VPs +
Managers + ICs and saw the variant pool rotate.

Org template lives at
Molecule-AI/molecule-ai-org-template-mock-bigorg (created today)
and is imported via the existing /org/import flow on the canvas
Template Palette.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-07 08:40:37 -07:00
70104d1cef Merge pull request #33 from molecule-ai/feat/demo-mock-1-purchase-success-modal
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feat(canvas): demo Mock #1 — purchase-success modal

Per Hongming directive: skip CI for 2h, admin-merge for funding demo.
2026-05-07 15:32:55 +00:00
Hongming Wang
a37a4a6e40 feat(canvas): demo Mock #1 — purchase-success modal on URL flag
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Funding-demo Mock #1: when the canvas loads with `?purchase_success=1`,
show a centred success modal in the warm-paper theme. Auto-dismisses
after 5s; Close button + Esc + backdrop click also dismiss; URL params
are stripped on first paint so a refresh after dismiss does not
re-trigger.

Mounted in `app/layout.tsx` (not `app/page.tsx`) so the modal persists
across the canvas page-state transitions (loading → hydrated → error)
without unmounting and losing its open-state.

No real billing logic — the marketplace "Purchase" button on the
landing page redirects here with the flag; this modal is the only
thing the user sees of the "transaction".

Local-verified end-to-end via playwright (5/5 tests pass): redirect
URL shape, modal visibility, URL cleanup, close button, refresh-after-
dismiss behaviour, 5s auto-dismiss.

Pairs with the Purchase button added to landingpage Marketplace
section.
2026-05-07 08:32:35 -07:00
85b09659e6 Merge pull request 'fix(ci): add scripts/** to publish-workspace-server-image path filter' (#32) from fix/publish-path-filter-add-scripts into main
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2026-05-07 15:19:12 +00:00
6de3c1ccd2 fix(ci): add scripts/** to publish-workspace-server-image path filter
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scripts/clone-manifest.sh runs inside the platform Dockerfile build,
so a change to that script needs to retrigger publish. Without it,
the prior fix (clone via Gitea + lowercase org) didn't trigger this
workflow because scripts/ wasn't in the path filter.

Also serves as the file change to satisfy the path filter for THIS
push, retriggering publish-workspace-server-image now.
2026-05-07 08:18:53 -07:00
d4256b9d83 Merge pull request 'fix(scripts): clone-manifest.sh — use Gitea + lowercase org slug (Class G)' (#31) from fix/clone-manifest-gitea into main
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2026-05-07 15:18:09 +00:00
8313b2a7a7 fix(scripts): clone-manifest.sh — use Gitea + lowercase org slug
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Post-2026-05-06 GitHub-org suspension: scripts/clone-manifest.sh
was still pointing at https://github.com/${repo}.git, so the
Docker build for workspace-server'\''s platform image fails at:

  fatal: could not read Username for 'https://github.com':
         No such device or address

with no credentials available in the build container.

Fix: clone from https://git.moleculesai.app/${repo}.git instead.
manifest.json'\''s repo paths still read 'Molecule-AI/...' (the
historic GitHub slug, mixed-case); Gitea lowercases the org
component to 'molecule-ai/...'. Lowercase the org segment on
the fly with awk so we don'\''t need to rewrite every manifest
entry.

Local verify: bash -n passes, lowercase transform produces correct
Gitea paths, anonymous git clone of one of the manifest plugins
over HTTPS to git.moleculesai.app succeeds.

Class G in the prod-ship CI sweep — same shape as the github.com
ref Harness Replays hits, this is the second instance found.
2026-05-07 08:17:58 -07:00
566c095571 Merge pull request 'chore(ci): trigger publish-workspace-server-image (path-filter satisfaction)' (#30) from chore/touch-publish-workflow-to-trigger into main
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2026-05-07 15:12:22 +00:00
694a036a7f chore(ci): trailing newline to retrigger publish-workspace-server-image (path-filter requires workflow file change)
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2026-05-07 08:12:10 -07:00
8c1dbc6ba5 Merge pull request 'chore(ci): retrigger publish-workspace-server-image post AWS secrets registration' (#29) from chore/retrigger-publish-post-aws-secrets into main
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2026-05-07 15:08:03 +00:00
72d0d4b44e chore(ci): retrigger publish-workspace-server-image post AWS secrets registration
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2026-05-07 08:07:46 -07:00
52e61d4704 fix(ci): cherry-pick PR#23 — drop github-app-auth plugin checkout (#28)
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2026-05-07 14:52:47 +00:00
devops-engineer
10e510f50c chore: drop github-app-auth + swap GHCR→ECR (closes #157, #161)
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Two coupled cleanups for the post-2026-05-06 stack:

============================================
The plugin injected GITHUB_TOKEN/GH_TOKEN via the App's
installation-access flow (~hourly rotation). Per-agent Gitea
identities replaced this approach after the 2026-05-06 suspension —
workspaces now provision with a per-persona Gitea PAT from .env
instead of an App-rotated token. The plugin code itself lived on
github.com/Molecule-AI/molecule-ai-plugin-github-app-auth which is
also unreachable post-suspension; checking it out at CI build time
was already failing.

Removed:
- workspace-server/cmd/server/main.go: githubappauth import + the
  `if os.Getenv("GITHUB_APP_ID") != ""` block that called
  BuildRegistry. gh-identity remains as the active mutator.
- workspace-server/Dockerfile + Dockerfile.tenant: COPY of the
  sibling repo + the `replace github.com/Molecule-AI/molecule-ai-
  plugin-github-app-auth => /plugin` directive injection.
- workspace-server/go.mod + go.sum: github-app-auth dep entry
  (cleaned up by `go mod tidy`).
- 3 workflows: actions/checkout steps for the sibling plugin repo:
    - .github/workflows/codeql.yml (Go matrix path)
    - .github/workflows/harness-replays.yml
    - .github/workflows/publish-workspace-server-image.yml

Verified `go build ./cmd/server` + `go vet ./...` pass post-removal.

=======================================================
Same workflow used to push to ghcr.io/molecule-ai/platform +
platform-tenant. ghcr.io/molecule-ai is gone post-suspension. The
operator's ECR org (153263036946.dkr.ecr.us-east-2.amazonaws.com/
molecule-ai/) already hosts platform-tenant + workspace-template-*
+ runner-base images and is the post-suspension SSOT for container
images. This PR aligns publish-workspace-server-image with that
stack.

- env.IMAGE_NAME + env.TENANT_IMAGE_NAME repointed to ECR URL.
- docker/login-action swapped for aws-actions/configure-aws-
  credentials@v4 + aws-actions/amazon-ecr-login@v2 chain (the
  standard ECR auth pattern; uses AWS_ACCESS_KEY_ID/SECRET secrets
  bound to the molecule-cp IAM user).

The :staging-<sha> + :staging-latest tag policy is unchanged —
staging-CP's TENANT_IMAGE pin still points at :staging-latest, just
with the new registry prefix.

Refs molecule-core#157, #161; parallel to org-wide CI-green sweep.
2026-05-07 07:48:51 -07:00
64a0bc1f7e fix(ci): use AUTO_SYNC_TOKEN for auto-sync main->staging (Class D)
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Same shape as molecule-controlplane#29: per-job GITHUB_TOKEN
doesn't have the Gitea API permissions to open PRs / push branches
the auto-sync flow needs. AUTO_SYNC_TOKEN is the devops-engineer
persona PAT (per saved memory feedback_per_agent_gitea_identity_default).

Companion prod ops (already done):
- devops-engineer added as collaborator on molecule-core (write)
- devops-engineer added to staging branch protection push_whitelist
- AUTO_SYNC_TOKEN registered as Actions secret on molecule-core
2026-05-07 07:01:46 -07:00
f29cbb3691 Merge pull request 'chore(ci): retrigger staging CI on new runner image' (#25) from chore/retrigger-staging-on-fixed-runner-image into staging
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2026-05-07 13:50:16 +00:00
devops-engineer
c8110b5766 chore(ci): retrigger staging CI on new runner image
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All current core/staging reds ran 12:14-12:33 BEFORE the runner
image swap (cloudflared bake + GOPROXY pipe-separator at 12:55).
This empty commit forces a fresh CI run under the post-fix
runner image so we can categorize:
  - REAL fails (need targeted fix)
  - STALE-cleared (was a runner-image issue, now fixed)
  - Genuinely unrelated (Auto-sync, CodeQL — Hongming-parked)

Per feedback_orchestrator_must_verify_before_declaring_fixed,
don't mass-mark stale — wait for fresh run, verify each context.
2026-05-07 06:48:13 -07:00
08e6f108ab Merge pull request 'chore: drop github-app-auth + swap GHCR→ECR (closes #157, #161)' (#23) from chore/drop-github-app-auth-and-ecr-swap into staging
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2026-05-07 12:14:36 +00:00
devops-engineer
1d8c101c94 chore: drop github-app-auth + swap GHCR→ECR (closes #157, #161)
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Two coupled cleanups for the post-2026-05-06 stack:

#157 — drop molecule-ai-plugin-github-app-auth
============================================
The plugin injected GITHUB_TOKEN/GH_TOKEN via the App's
installation-access flow (~hourly rotation). Per-agent Gitea
identities replaced this approach after the 2026-05-06 suspension —
workspaces now provision with a per-persona Gitea PAT from .env
instead of an App-rotated token. The plugin code itself lived on
github.com/Molecule-AI/molecule-ai-plugin-github-app-auth which is
also unreachable post-suspension; checking it out at CI build time
was already failing.

Removed:
- workspace-server/cmd/server/main.go: githubappauth import + the
  `if os.Getenv("GITHUB_APP_ID") != ""` block that called
  BuildRegistry. gh-identity remains as the active mutator.
- workspace-server/Dockerfile + Dockerfile.tenant: COPY of the
  sibling repo + the `replace github.com/Molecule-AI/molecule-ai-
  plugin-github-app-auth => /plugin` directive injection.
- workspace-server/go.mod + go.sum: github-app-auth dep entry
  (cleaned up by `go mod tidy`).
- 3 workflows: actions/checkout steps for the sibling plugin repo:
    - .github/workflows/codeql.yml (Go matrix path)
    - .github/workflows/harness-replays.yml
    - .github/workflows/publish-workspace-server-image.yml

Verified `go build ./cmd/server` + `go vet ./...` pass post-removal.

#161 — swap GHCR→ECR for publish-workspace-server-image
=======================================================
Same workflow used to push to ghcr.io/molecule-ai/platform +
platform-tenant. ghcr.io/molecule-ai is gone post-suspension. The
operator's ECR org (153263036946.dkr.ecr.us-east-2.amazonaws.com/
molecule-ai/) already hosts platform-tenant + workspace-template-*
+ runner-base images and is the post-suspension SSOT for container
images. This PR aligns publish-workspace-server-image with that
stack.

- env.IMAGE_NAME + env.TENANT_IMAGE_NAME repointed to ECR URL.
- docker/login-action swapped for aws-actions/configure-aws-
  credentials@v4 + aws-actions/amazon-ecr-login@v2 chain (the
  standard ECR auth pattern; uses AWS_ACCESS_KEY_ID/SECRET secrets
  bound to the molecule-cp IAM user).

The :staging-<sha> + :staging-latest tag policy is unchanged —
staging-CP's TENANT_IMAGE pin still points at :staging-latest, just
with the new registry prefix.

Refs molecule-core#157, #161; parallel to org-wide CI-green sweep.
2026-05-07 05:12:06 -07:00
fd1fbd2c5f Merge pull request 'docs(README): comprehensive refresh — landing-page icon (light/dark SVG) + 8 runtimes + Canvas v4 + Memory v2 + SaaS + channel plugin' (#5) from docs/readme-comprehensive-refresh-2026-05-06 into staging
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2026-05-07 11:46:29 +00:00
ea7f35b724 docs(README.zh-CN): mirror EN refresh — 8 runtimes + Canvas v4 + Memory v2 + SaaS + channel plugin
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Brings the Chinese README to parity with the comprehensive English
refresh in the same PR:

- Icon: PNG → SVG (light/dark adaptive)
- Runtimes: 6 → 8 (added Hermes 4 + Gemini CLI to pitch line, "Runtime
  choice" section, comparison table)
- Canvas v4 — warm-paper 主题系统 callout
- Memory v2 — pgvector 语义召回 callout
- RFC #2967 typed-SSOT A2A 响应路径 — platform ship list + arch diagram
- SaaS section — 多租户 EC2 + Neon + Cloudflare Tunnels, WorkOS, Stripe,
  KMS, tenant_resources 审计 + 30 分钟 reconciler
- molecule-mcp-claude-channel section — 在 Claude Code 里直接接入,
  marketplace 安装流程, 多租户配置
- Architecture diagram redrawn (Canvas v4 → Platform 1.25 → Provisioner
  Docker|EC2+SSM, plus SaaS Control Plane block)
- "Current Scope" updated — Canvas v4, Memory v2, 8 adapters, RFC
  #2967, SaaS surface

Translation kept idiomatic — used Chinese tech terms where natural
(语义召回, 多租户, 信封加密) and kept English for established
proper nouns (Hermes, Gemini CLI, RFC #2967, pgvector, WorkOS, KMS).

🤖 Generated with [Claude Code](https://claude.com/claude-code)
2026-05-07 04:42:40 -07:00
132f97d261 docs(README): comprehensive refresh — landing-page icon (SVG, light/dark) + 8 runtimes + Canvas v4 + Memory v2 + SaaS + channel plugin
The README hadn't been refreshed since the v0 wave. Several major
shipped surfaces weren't called out (Canvas v4 warm-paper theme,
Memory v2 with pgvector, RFC #2967 typed-SSOT A2A response path,
the SaaS control plane, the molecule-mcp-claude-channel plugin we
just shipped via v0.4.0/0.4.1/0.4.2). The runtime list still said
"6" when 8 are in production. The icon was a 1.3 MB PNG with no
light-mode variant.

- New `docs/assets/branding/molecule-icon.svg` matches the landing
  page's `public/favicon.svg` shape (5-spoke molecular graph) but
  carries `prefers-color-scheme` styles so it adapts to GitHub's
  light/dark modes. The PNG stays for back-compat with anything
  that hotlinks it.
- `docs/assets/branding/molecule-logo.svg` adds a wordmark variant
  for places that want the brand name alongside the icon.
- README hero replaces the PNG `<img>` with the SVG so contributors
  reading on GitHub light see a tinted version that doesn't blow
  out the page background.

- **8 production runtimes** named explicitly throughout: Claude
  Code, Hermes, Gemini CLI, LangGraph, DeepAgents, CrewAI, AutoGen,
  OpenClaw. Comparison table grew Hermes 4 + Gemini CLI rows with
  the integration mechanism (Option B upstream hook, A2A bridge,
  multi-provider derivation).
- **Canvas v4** — warm-paper theme system (light / dark / follow-
  system) called out alongside the existing Next.js 15 / React Flow /
  Zustand stack.
- **Memory v2 backed by pgvector** — semantic recall callout in
  both the "memory model" pitch line and the runtime stack section.
- **RFC #2967 typed-SSOT A2A response path** named in the platform
  ship list + architecture diagram.
- **SaaS surface section** added — multi-tenant EC2 + Neon +
  Cloudflare Tunnels, WorkOS + Stripe, KMS envelope, tenant_resources
  audit + 30-min reconciler. Cross-links to molecule-controlplane.
- **molecule-mcp-claude-channel plugin** added — entry point for
  Claude Code users to bridge A2A traffic into a local session via
  MCP. Documents the standard marketplace install flow + multi-
  tenant config.
- **Architecture diagram** redrawn with Canvas → Platform → Postgres
  + Provisioner (Docker | EC2+SSM) layout, plus a SaaS control plane
  block.
- **Quick Start** repo URL fixed (`molecule-monorepo` → `molecule-core`),
  Go version bumped to 1.25, Python ≥3.11 noted.

- Deploy buttons + Quick Start URL all bump from the old
  `molecule-monorepo` name to the current `molecule-core`. Pre-fix
  these clicked through to a 404.

The provisioner refactor (`registry.go` deletion + RegistryPrefix
env-driven changes) that lived alongside an earlier draft of this
README on the `docs/readme-refresh-2026-05-06` branch is OUT of
this PR — that work shipped separately via #6. This branch is
docs-only so the review surface is small and the merge is reversible.

- `git diff staging --stat`:
  ```
  README.md                              | 75 +++++++++++++++++++++++-----------
  docs/assets/branding/molecule-icon.svg | 28 +++++++++++++
  docs/assets/branding/molecule-logo.svg | 17 ++++++++
  3 files changed, 97 insertions(+), 23 deletions(-)
  ```
- SVGs validated in a browser at light + dark `prefers-color-scheme`.
- All linked docs (./docs/index.md, ./docs/quickstart.md, ./docs/
  architecture/architecture.md, ./docs/api-protocol/platform-api.md,
  ./docs/agent-runtime/workspace-runtime.md, ./LICENSE, etc.) verified
  to exist on staging.

- README.zh-CN.md mirror — non-trivial translation work; file as
  separate issue if mirror is wanted.
- molecule-ai/.github org-profile README — Gitea has no equivalent
  to GitHub's org-profile surface, and the GitHub org is suspended.
  Skipped.

🤖 Generated with [Claude Code](https://claude.com/claude-code)
2026-05-07 04:42:40 -07:00
6a7dcd287c Merge pull request 'feat(canvas/chat-server): canvas consumes /chat-history + server-side row-aware reverse (RFC #2945 PR-C-2)' (#4) from feat/rfc-2945-pr-c-2-canvas-chat-history into staging
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2026-05-07 11:38:54 +00:00
b49bdde997 Merge pull request 'fix(workspace-server): CP orphan sweeper closes deprovision split-write race (#2989)' (#2) from fix/cp-orphan-sweeper-2989 into staging
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6fac24e3de Merge pull request 'fix(workspace-server): SSOT-route container check + 422 on external runtimes (closes #10)' (#12) from fix/issue10-runtime-aware-plugin-install into main
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2026-05-07 11:27:52 +00:00
f51722411b Merge branch 'main' into fix/issue10-runtime-aware-plugin-install
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2026-05-07 11:26:14 +00:00
f0015bff81 Merge pull request 'fix(workspace-server): default-bind to 127.0.0.1 in dev-mode fail-open (closes #7)' (#8) from fix/s8-bind-loopback-dev into main
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2026-05-07 11:25:48 +00:00
b72d1d3f26 Merge branch 'main' into fix/issue10-runtime-aware-plugin-install
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2026-05-07 11:25:24 +00:00
a674a6547e Merge branch 'main' into fix/s8-bind-loopback-dev
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2026-05-07 11:25:20 +00:00
f140b19e79 Merge pull request 'perf(workspace-server,canvas): EIC tunnel pool + canvas Promise.all (closes core#11)' (#13) from feat/eic-tunnel-pool-core-11 into staging
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2026-05-07 11:10:25 +00:00
f2f5338183 Merge pull request 'fix(ci): lowercase 'molecule-ai/' in cross-repo workflow refs' (#17) from fix/lowercase-org-slug into main
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2026-05-07 10:38:12 +00:00