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5 Commits

Author SHA1 Message Date
Hongming Wang
2e40916b57
fix(validator): handle abstract intermediates + class-aliasing + lock GITHUB_TOKEN scope (#21)
Independent post-merge review of #19 surfaced two more findings.
Both shipped here.

Q3 — abstract intermediates + multiple-concrete-classes.

  The class-discovery filter from O1 (#19) only excluded BaseAdapter
  itself. Two failure modes slipped through:

    (a) A locally-defined abstract intermediate
        `class FrameworkAdapter(BaseAdapter): @abstractmethod ...`
        passed the filter, falsely satisfying "at least one
        concrete subclass" while still being non-instantiable at
        workspace boot.

    (b) A template defining BOTH `class FrameworkAdapter(BaseAdapter)`
        AND `class ConcreteAdapter(FrameworkAdapter)` had both pass
        the filter, producing a silent ambiguity where the runtime's
        class-discovery picks one per its resolution rules — wrong
        class loaded after a future runtime refactor.

  Fixes:
    - Add `not inspect.isabstract(obj)` to the discovery filter so
      abstract intermediates are excluded.
    - Hard-error if `len(adapter_classes) > 1` listing both names so
      the contributor knows exactly which classes are competing.

  Three new tests pin the behaviors:
    - test_abstract_intermediate_alone_does_not_count
    - test_abstract_plus_concrete_passes_with_concrete_only
    - test_multiple_concrete_baseadapter_subclasses_errors

Identity-based deduplication.

  Caught against the real langgraph template during smoke-testing
  the Q3 fix: production adapters often do
  `Adapter = ConcreteAdapter` as a module-level alias for the
  runtime's discovery convention. `vars(mod)` returns BOTH bindings
  pointing at the same class object, so the new
  multiple-concrete-classes error fired falsely on every aliased
  template.

  Fix: deduplicate by `id(obj)` BEFORE counting, so the same class
  object under multiple bindings counts once. New regression test
  test_aliased_concrete_class_is_deduplicated pins this against
  any future filter regression.

Existing tests updated to use fully-concrete BaseAdapter subclasses
(matching production templates) since the new abstract-filter
correctly rejects partial stubs that don't override every abstract
method BaseAdapter declares (5 methods: name, display_name,
description, setup, create_executor).

Q5 — GITHUB_TOKEN scope lockdown.

  validate-workspace-template.yml runs untrusted-by-design code from
  the calling template repo: pip post-install hooks, adapter.py
  imports, Dockerfile RUN steps. Each of those primitives executes
  with GITHUB_TOKEN in env. The workflow had no `permissions:`
  block, defaulting to whatever the calling repo grants — often
  contents: write.

  Add `permissions: contents: read` at the workflow level. Worst-
  case-with-token now drops to "read public repo state" — no write
  to issues, no push to branches, no comment-spam, no workflow
  re-trigger. Partial mitigation; the deeper `pull_request_target`
  discipline is bigger scope (tracked separately).

Verification:
  - 47/47 tests pass (was 43; +3 abstract/multi-concrete + +1 alias)
  - All 8 production templates pass the full updated validator
    end-to-end with 0 warnings / 0 errors

Co-authored-by: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-04-28 12:27:09 -07:00
Hongming Wang
f125d68910
fix(validator): address post-merge review findings on #17 + #18 (#19)
Independent code review of #17 (adapter runtime-load) and #18 (schema
versioning) surfaced four Required and three Optional findings worth
fixing before the patterns harden into the codebase.

Required:

  R1: Delete .molecule-ci/scripts/{validate-workspace-template,
      migrate-template}.py — dead-vendored mirror. The new validator
      workflow invokes .molecule-ci-canonical/scripts/ (the canonical
      clone), not .molecule-ci/scripts/. The mirror was the exact drift
      class #90 is supposed to eliminate: next contributor would edit
      one copy and silently diverge. Other workflows (validate-plugin,
      validate-org-template) still use the legacy path and keep their
      own scripts there — so removing OUR two files is asymmetric but
      correct, and the legacy path can phase out organically.

  R2: validate-workspace-template.yml's `cache-dependency-path` pointed
      at the validator's own deps file (just `pyyaml>=6.0`). Pip cache
      key never invalidated when the template added crewai/langgraph/
      etc. Repoint to the calling repo's `requirements.txt`, which is
      the file the heavy install actually uses one step later.

  R3: `_check_schema_v1` looped `SCHEMA_V1_REQUIRED_KEYS` and re-emitted
      "missing required key `template_schema_version`" — but the
      dispatcher already verified the field is present + int before
      reaching v1, so that branch was dead defensive code. Skip it
      explicitly with a comment, but keep the field in the constant for
      contract documentation + the unknown-keys filter.

  R4: `_template_adapter_under_validation` was a fixed sys.modules key,
      meaning back-to-back invocations in the same Python process
      shared the slot. Use a per-call-unique name keyed on the absolute
      path's hash. No observed bug today; defensive-only.

Optional:

  O1: Class-discovery filter now also requires `__module__ == module_name`.
      Without this, an `from molecule_runtime.adapters.base import
      AbstractCLIAdapter` re-export would count as a "real" adapter,
      masking the genuine "no concrete subclass" case the gate exists
      to catch. Cheap and forward-proofs against any future abstract
      intermediate the runtime might expose. Added a sibling test
      pinning the new behavior.

  O2: migrate-template.py's docstring claimed "uses ruamel.yaml when
      available" but the implementation only ever calls `yaml.safe_dump`.
      Replaced the lie with a clearer caveat block + a forward-pointer
      to ruamel-when-comments-detected as a future enhancement.

  O3: Reordered the workflow so the secret-scan step runs BEFORE
      `pip install -r requirements.txt`. Same threat surface as the
      Docker build smoke (which already runs first), but cheap defense-
      in-depth: a malicious template PR adding a malicious dep to
      requirements.txt now has its post-install hook execute AFTER the
      secret scanner has already inspected the diff.

Test changes:

  - test_adapter_with_no_baseadapter_subclass_errors updated for the
    new error message ("no concrete class inheriting from").
  - New test_only_imported_baseadapter_subclass_does_not_count pins
    the O1 __module__-filter behavior.
  - 43/43 tests pass (was 42/42 before the new test).
  - Real langgraph template still passes the full validator end-to-end.

Co-authored-by: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-04-28 12:17:44 -07:00
Hongming Wang
84a104a146
feat(validator): schema-version dispatch + migrate-template.py framework (#18)
Closes the schema-versioning workstream of #90. Sets up the machinery
for "we will be updating a lot" (the user's framing) without forcing
the first real schema bump to discover semantics under deadline
pressure. Today every template is at v1; this PR adds the framework,
ships zero behavior change for v1 templates, and reserves v2+ for
when there's a concrete reason to bump.

Validator changes:

  - `KNOWN_SCHEMA_VERSIONS = {1}` — the set the validator currently
    accepts. Future bumps add to this set.
  - `DEPRECATED_SCHEMA_VERSIONS: set[int] = set()` — versions accepted
    with warning during a deprecation window.
  - Per-version contract: `_check_schema_v1(config)` enforces the v1
    REQUIRED_KEYS / OPTIONAL_KEYS / KNOWN_RUNTIMES contract — exactly
    what the previous monolithic check_config_yaml did.
  - Dispatch table: `SCHEMA_CHECKS = {1: _check_schema_v1}`. Versions
    that aren't in the table hard-error.

  - check_config_yaml() now: reads template_schema_version → emits
    deprecation warning if applicable → dispatches to the right
    SCHEMA_CHECKS entry → unknown versions hard-error with actionable
    instructions ("add a SCHEMA_V<N> block").

  - Schema versions are FROZEN once shipped: never edit a SCHEMA_V<N>
    constant in place. To bump, ADD v<N+1> alongside, deprecate v<N>,
    migrate consumers, drop v<N> next cycle. Header comment documents
    the discipline.

New script `migrate-template.py`:

  - `MIGRATIONS: dict[int, Callable[[dict], dict]]` registry — each
    entry maps a SOURCE version to the function that produces the
    next version's dict. Empty today.
  - `migrate_config(config, from, to)` chains migrations sequentially.
    Forward-only (errors on backward), errors on missing intermediate
    steps (never silently skip), asserts every migration stamps its
    output's template_schema_version.
  - CLI: `migrate-template.py [--from N] [--to M] [--dry-run] DIR`.
    Defaults: --from = whatever config.yaml declares, --to = highest
    reachable from MIGRATIONS (currently 1, so a no-op).

Behavior change to the existing
test_missing_required_keys_errors test:

  Previously the validator emitted 3 "missing required key" errors
  when name/runtime/template_schema_version were all missing. Now it
  short-circuits on missing version with a single actionable error —
  listing downstream missing keys is noise on top of the real
  problem (no version means we can't pick a contract). The test was
  updated to pin the new behavior; a new sibling test
  (test_missing_required_keys_under_v1_dispatch_errors) pins that v1
  still lists name/runtime/etc. when present-with-v1.

Verification:

  - 42/42 tests pass (20 prior + 9 new schema-dispatch tests in
    test_validate_workspace_template.py + 17 new migrator tests in
    test_migrate_template.py).
  - Real langgraph template runs through the full updated validator
    end-to-end with 0 warnings / 0 errors.

This + #17 means #90 is done end-to-end:
  - Phase 2: validator green on all 8 templates as a required check (already shipped)
  - Phase 2.5: adapter.py runtime-load contract (#17)
  - Phase 3: schema versioning + migration framework (this PR)

Co-authored-by: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-04-28 12:07:04 -07:00
Hongming Wang
8309a55e6c
feat(validator): runtime-load check for adapter.py contract (#17)
Adds the third workstream of #90 (eliminate template repo drift): a
strong contract check that exercises adapter.py the same way the
runtime does at workspace boot. Without this, a template can have a
syntactically-valid Dockerfile + an adapter.py that ImportErrors at
runtime, build clean through Docker smoke, and crash on first user
prompt — exactly the human-error class #90 is meant to eliminate.

Existing checks ranked from weakest to strongest:

  1. check_adapter()         — text-grep for legacy `molecule_ai`
                                imports. Catches one specific footgun.
  2. Docker build smoke      — `docker build` succeeds. Doesn't RUN
                                the image, so adapter.py is never
                                imported. Misses every adapter-load
                                bug.
  3. (NEW) check_adapter_runtime_load — imports adapter.py via the
                                same `importlib.spec_from_file_location`
                                path the runtime uses, and asserts at
                                least one class inherits from
                                molecule_runtime.adapters.base.BaseAdapter.

Hard-error conditions:
  - adapter.py raises any exception during import (SyntaxError,
    ImportError, NameError, etc.). Same exception would crash the
    workspace at boot.
  - No class in the module inherits from BaseAdapter. The runtime's
    class-discovery silently falls through to the default langgraph
    executor in this case — exactly the silent-failure shape the
    contract is meant to catch.

Skip conditions:
  - No adapter.py exists. Templates without one inherit the default
    executor by design (policy, not drift).
  - molecule-ai-workspace-runtime not importable in the validator
    env. Warns loudly so the CI-config bug surfaces, but doesn't
    hard-fail (we'd be reporting "your adapter is broken" when the
    actual cause is missing infra).

Workflow update: validate-workspace-template.yml now installs the
template's requirements.txt before invoking the validator (or
falls back to installing molecule-ai-workspace-runtime alone if the
template has no requirements.txt). This satisfies the runtime-load
check's import dependencies the same way the workspace container
does at boot — `pip install -r requirements.txt`.

Verified locally:
  - 20/20 tests in test_validate_workspace_template.py pass
    (14 existing + 6 new).
  - Real langgraph template passes the full new validator including
    runtime-load (0 warnings, 0 errors).
  - Surveyed all 8 production templates' adapter.py shapes; every
    one already inherits from BaseAdapter, so this check turns green
    on first run with zero per-template fixups needed.

Co-authored-by: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-04-28 12:02:33 -07:00
Hongming Wang
73102cdaa9 feat(validate-workspace-template): strict drift gate + canonical-fetch workflow
P6 Phase 1: enforce the workspace-template contract via CI on every
template-repo push, eliminating the slow drift that produced 8
copies of a 28-line Dockerfile in different states of decay.

The previous validator (50 lines, soft warnings only) couldn't
catch the cache-trap pattern (Dockerfile missing ARG RUNTIME_VERSION)
that silently shipped the previous runtime wheel during cascade
publishes — observed five times in a row on 2026-04-27. Hardened
into structural checks that fail CI, not just warn:

  - Dockerfile must base on python:3.11-slim
  - Dockerfile must declare ARG RUNTIME_VERSION AND reference
    ${RUNTIME_VERSION} in a RUN block (the arg has to be in the
    layer's command line for docker to hash it into the cache key)
  - Dockerfile must create the agent uid-1000 user (Claude Code
    refuses --dangerously-skip-permissions as root for safety)
  - Dockerfile must end at molecule-runtime — directly via
    ENTRYPOINT or via a wrapper script that exec's it (claude-code
    has entrypoint.sh for gosu drop-priv; hermes has start.sh to
    boot the hermes-agent daemon first; both are allowed)
  - config.yaml must have name + runtime + integer
    template_schema_version. Quoted "1" fails — observed previously
    in a copy-pasted template that the YAML loader turned into str
  - requirements.txt must declare molecule-ai-workspace-runtime

Also fixed: the original validator's warning telling adapter.py
NOT to import molecule_runtime was backwards — that's the
canonical package name post-#87. Now it warns on the legacy
molecule_ai prefix instead.

Reusable workflow change: instead of running
.molecule-ci/scripts/validate-workspace-template.py (a per-template
vendored copy that drifts as the validator evolves), the workflow
now checks out molecule-ci itself into .molecule-ci-canonical and
runs the canonical script from there. Single source of truth —
every template runs the SAME contract on every CI run. The legacy
.molecule-ci/scripts/ directories in each template repo can be
deleted in a Phase 2 cleanup PR.

14 unit tests pin the contract:
  - canonical template passes
  - claude-code-style custom entrypoint passes when the wrapper
    exec's molecule-runtime
  - 5 Dockerfile drift modes each error individually
  - 3 config.yaml drift modes each error/warn
  - requirements.txt missing-runtime errors
  - legacy molecule_ai import warns
  - regression cover: modern molecule_runtime import does NOT
    trigger the (deleted) backwards warning

All 8 production template repos pass the new contract today —
this PR locks in the current good state, it does not force any
template-repo edits.

Contract documented at docs/template-contract.md so the rules are
discoverable without reading the validator.
2026-04-27 14:50:55 -07:00