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Hongming Wang 295c4d930a chore: open-source preparation — scrub secrets, add community files 
Security:
- Replace hardcoded Cloudflare account/zone/KV IDs in wrangler.toml
  with placeholders; add wrangler.toml to .gitignore, ship .example
- Replace real EC2 IPs in docs with <EC2_IP> placeholders
- Redact partial CF API token prefix in retrospective
- Parameterize Langfuse dev credentials in docker-compose.infra.yml
- Replace Neon project ID in runbook with <neon-project-id>

Community:
- Add CONTRIBUTING.md (build, test, branch conventions, CI info)
- Add CODE_OF_CONDUCT.md (Contributor Covenant 2.1)

Cleanup:
- Replace personal runner username/machine name in CI + PLAN.md
- Replace personal tenant URL in MCP setup guide
- Replace personal author field in bundle-system doc
- Replace personal login in webhook test fixture
- Rewrite cryptominer incident reference as generic security remediation
- Remove private repo commit hashes from PLAN.md

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
2026-04-18 00:10:56 -07:00
..
.vitepress initial commit — Molecule AI platform 2026-04-13 11:55:37 -07:00
adapters initial commit — Molecule AI platform 2026-04-13 11:55:37 -07:00
agent-runtime chore: open-source preparation — scrub secrets, add community files 2026-04-18 00:10:56 -07:00
api-protocol docs(platform-api): Breaking Changes section for PR #701 auth + validation 2026-04-17 12:44:11 +00:00
architecture chore: open-source preparation — scrub secrets, add community files 2026-04-18 00:10:56 -07:00
assets/branding chore: replace brand icon and add HANDOFF.md 2026-04-13 13:03:40 -07:00
blog/2026-04-17-deploy-anywhere docs(blog): deploy anywhere — Fly Machines + control plane provisioners 2026-04-17 00:38:06 +00:00
demo initial commit — Molecule AI platform 2026-04-13 11:55:37 -07:00
development docs: correct stale test counts in PR #9 2026-04-13 17:51:12 -07:00
edit-history docs: sync CLAUDE.md + PLAN.md + edit-history with 2026-04-15 overnight sweep 2026-04-15 12:16:24 -07:00
frontend initial commit — Molecule AI platform 2026-04-13 11:55:37 -07:00
guides chore: open-source preparation — scrub secrets, add community files 2026-04-18 00:10:56 -07:00
integrations fix(opencode): update URL example in opencode.md + add WORKSPACE_ID env var 2026-04-17 22:06:37 +00:00
marketing docs(competitors): downgrade Paperclip threat HIGH → MEDIUM (#581) 2026-04-17 00:45:53 +00:00
plugins docs(plugins): record hermes compat for 5 SKILL.md plugins (issue #852) 2026-04-18 01:25:31 +00:00
product initial commit — Molecule AI platform 2026-04-13 11:55:37 -07:00
research initial commit — Molecule AI platform 2026-04-13 11:55:37 -07:00
retrospectives chore: open-source preparation — scrub secrets, add community files 2026-04-18 00:10:56 -07:00
runbooks chore: open-source preparation — scrub secrets, add community files 2026-04-18 00:10:56 -07:00
security docs(security): SAFE-MCP internal advisory 2026-04-17 (distilled from PR #808 audit) 2026-04-17 23:39:00 +00:00
spikes chore: move spike/ → docs/spikes/ — keep explorations out of repo root 2026-04-17 16:09:12 -07:00
tutorials Merge pull request #578 from Molecule-AI/docs/devrel-feat-525 2026-04-16 18:47:17 -07:00
.gitignore initial commit — Molecule AI platform 2026-04-13 11:55:37 -07:00
api-reference.md initial commit — Molecule AI platform 2026-04-13 11:55:37 -07:00
architecture.md initial commit — Molecule AI platform 2026-04-13 11:55:37 -07:00
ecosystem-research-outcomes.md initial commit — Molecule AI platform 2026-04-13 11:55:37 -07:00
ecosystem-watch.md chore(eco-watch): resolve merge conflict — keep BLOCKED MemPalace + run b entries 2026-04-18 03:14:23 +00:00
glossary.md docs(glossary): add GitHub Awesome Copilot disambiguation section 2026-04-17 16:27:41 +00:00
index.md initial commit — Molecule AI platform 2026-04-13 11:55:37 -07:00
known-issues.md initial commit — Molecule AI platform 2026-04-13 11:55:37 -07:00
package-lock.json initial commit — Molecule AI platform 2026-04-13 11:55:37 -07:00
package.json initial commit — Molecule AI platform 2026-04-13 11:55:37 -07:00
quickstart.md initial commit — Molecule AI platform 2026-04-13 11:55:37 -07:00
README.md chore: structural cleanup — dead dirs, moves, gitignore 2026-04-13 14:06:52 -07:00
remote-workspaces-readiness.md docs: update remote-workspaces-readiness for Phase 30.1 shipped status 2026-04-16 08:49:07 -07:00
workspace-runtime-package.md chore: extract workspace runtime to PyPI + move adapter Dockerfiles to template repos 2026-04-16 04:33:10 -07:00

README.md

docs/

This directory serves two purposes:

  1. Markdown content — everything under architecture/, agent-runtime/, api-protocol/, development/, frontend/, plugins/, product/, etc. This is what agents and humans read.
  2. VitePress site — .vitepress/config.ts, package.json, package-lock.json. These drive the rendered documentation site.

Local preview

cd docs
npm install
npm run dev      # preview on http://localhost:5173
npm run build    # static build to docs/.vitepress/dist/

Conventions

  • New top-level docs must be linked from PLAN.md, README.md, and CLAUDE.md — otherwise agents can't find them (see .claude/ memory feedback_cross_reference_docs.md).
  • edit-history/YYYY-MM-DD.md is append-only log of significant changes; don't rewrite history.
  • archive/ holds one-shot analyses and retired docs — kept for context but not maintained.

Why site tooling lives here (not in docs-site/)

VitePress expects its config at <root>/.vitepress/config.ts where <root> is also the content directory. Splitting tooling into a sibling docs-site/ would require a non-trivial srcDir shim and break relative links in .vitepress/config.ts. Keeping both together is the pragmatic choice; this README is the tradeoff ledger.