forked from molecule-ai/molecule-core
claude-ceo-assistant
aa22183e52
Mechanical pin: 4 `actions/upload-artifact@v4.6.2/v7.0.1` uses → `@v3`. v4+/v7+ rely on a runtime API shape that Gitea's act_runner v0.6.x doesn't fully support. v3 uses the legacy server protocol act_runner ships end-to-end. Files (4 uses): - .github/workflows/ci.yml:238 (v4.6.2 → v3) - .github/workflows/codeql.yml:124 (v7.0.1 → v3) - .github/workflows/e2e-staging-canvas.yml:142 (v7.0.1 → v3) - .github/workflows/e2e-staging-canvas.yml:150 (v7.0.1 → v3) YAML parse green on all 3 files. Sister PRs land for `molecule-controlplane` and `codex-channel-molecule`. Per internal#46 Phase 2 audit; tracked under that umbrella. 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
439 lines
21 KiB
YAML
439 lines
21 KiB
YAML
name: CI
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on:
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push:
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branches: [main, staging]
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pull_request:
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branches: [main, staging]
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# GitHub merge queue fires `merge_group` for the queue's pre-merge CI run.
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# Required so the queue gets a real check result instead of a false-green
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# from the absence of a triggered workflow. Safe to add unconditionally —
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# the event simply doesn't fire until the queue is enabled on the branch.
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merge_group:
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types: [checks_requested]
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# Cancel in-progress CI runs when a new commit arrives on the same ref.
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# This prevents stale runs from queuing behind each other. The merge_group
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# refs (refs/heads/gh-readonly-queue/...) get their own concurrency group
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# automatically because github.ref differs from the PR ref.
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concurrency:
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group: ci-${{ github.ref }}
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cancel-in-progress: true
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jobs:
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# Detect which paths changed so downstream jobs can skip when only
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# docs/markdown files were modified.
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changes:
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name: Detect changes
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runs-on: ubuntu-latest
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outputs:
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platform: ${{ steps.check.outputs.platform }}
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canvas: ${{ steps.check.outputs.canvas }}
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python: ${{ steps.check.outputs.python }}
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scripts: ${{ steps.check.outputs.scripts }}
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steps:
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- uses: actions/checkout@de0fac2e4500dabe0009e67214ff5f5447ce83dd # v6.0.2
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with:
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fetch-depth: 0
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- id: check
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run: |
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# For PR events: diff against the base branch (not HEAD~1 of the branch,
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# which may be unrelated after force-pushes). When a push updates a PR,
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# both pull_request and push events fire — prefer the PR base so that
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# the diff is always computed against the actual merge base, not the
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# previous SHA on the branch which may be on a different history line.
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BASE="${GITHUB_BASE_REF:-${{ github.event.before }}}"
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# GITHUB_BASE_REF is set by GitHub for PR events (the base branch name).
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# For pull_request events we use the stored base.sha; for push events
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# (or when base.sha is unavailable) fall back to github.event.before.
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if [ "${{ github.event_name }}" = "pull_request" ] && [ -n "${{ github.event.pull_request.base.sha }}" ]; then
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BASE="${{ github.event.pull_request.base.sha }}"
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fi
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# Fallback: if BASE is empty or all zeros (new branch), run everything
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if [ -z "$BASE" ] || echo "$BASE" | grep -qE '^0+$'; then
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echo "platform=true" >> "$GITHUB_OUTPUT"
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echo "canvas=true" >> "$GITHUB_OUTPUT"
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echo "python=true" >> "$GITHUB_OUTPUT"
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echo "scripts=true" >> "$GITHUB_OUTPUT"
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exit 0
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fi
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DIFF=$(git diff --name-only "$BASE" HEAD 2>/dev/null || echo ".github/workflows/ci.yml")
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echo "platform=$(echo "$DIFF" | grep -qE '^workspace-server/|^\.github/workflows/ci\.yml$' && echo true || echo false)" >> "$GITHUB_OUTPUT"
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echo "canvas=$(echo "$DIFF" | grep -qE '^canvas/|^\.github/workflows/ci\.yml$' && echo true || echo false)" >> "$GITHUB_OUTPUT"
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echo "python=$(echo "$DIFF" | grep -qE '^workspace/|^\.github/workflows/ci\.yml$' && echo true || echo false)" >> "$GITHUB_OUTPUT"
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echo "scripts=$(echo "$DIFF" | grep -qE '^tests/e2e/|^scripts/|^infra/scripts/|^\.github/workflows/ci\.yml$' && echo true || echo false)" >> "$GITHUB_OUTPUT"
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# Platform (Go) is a required check on staging. Always-run + per-step
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# gating (see Canvas (Next.js) for the rationale and the failure mode
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# this avoids).
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platform-build:
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name: Platform (Go)
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needs: changes
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runs-on: ubuntu-latest
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defaults:
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run:
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working-directory: workspace-server
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steps:
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- if: needs.changes.outputs.platform != 'true'
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working-directory: .
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run: echo "No platform/** changes — skipping real build steps; this job always runs to satisfy the required-check name on branch protection."
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- if: needs.changes.outputs.platform == 'true'
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uses: actions/checkout@de0fac2e4500dabe0009e67214ff5f5447ce83dd # v6.0.2
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- if: needs.changes.outputs.platform == 'true'
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uses: actions/setup-go@40f1582b2485089dde7abd97c1529aa768e1baff # v5
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with:
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go-version: 'stable'
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- if: needs.changes.outputs.platform == 'true'
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run: go mod download
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- if: needs.changes.outputs.platform == 'true'
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run: go build ./cmd/server
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# CLI (molecli) moved to standalone repo: github.com/Molecule-AI/molecule-cli
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- if: needs.changes.outputs.platform == 'true'
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run: go vet ./... || true
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- if: needs.changes.outputs.platform == 'true'
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name: Run golangci-lint
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run: golangci-lint run --timeout 3m ./... || true
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- if: needs.changes.outputs.platform == 'true'
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name: Run tests with race detection and coverage
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run: go test -race -coverprofile=coverage.out ./...
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- if: needs.changes.outputs.platform == 'true'
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name: Per-file coverage report
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# Advisory — lists every source file with its coverage so reviewers
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# can see at-a-glance where gaps are. Sorted ascending so the worst
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# offenders float to the top. Does NOT fail the build; the hard
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# gate is the threshold check below. (#1823)
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run: |
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echo "=== Per-file coverage (worst first) ==="
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go tool cover -func=coverage.out \
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| grep -v '^total:' \
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| awk '{file=$1; sub(/:[0-9][0-9.]*:.*/, "", file); pct=$NF; gsub(/%/,"",pct); s[file]+=pct; c[file]++}
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END {for (f in s) printf "%6.1f%% %s\n", s[f]/c[f], f}' \
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| sort -n
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- if: needs.changes.outputs.platform == 'true'
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name: Check coverage thresholds
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# Enforces two gates from #1823 Layer 1:
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# 1. Total floor (25% — ratchet plan in COVERAGE_FLOOR.md).
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# 2. Per-file floor — non-test .go files in security-critical
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# paths with coverage <10% fail the build, UNLESS the file
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# path is listed in .coverage-allowlist.txt (acknowledged
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# historical debt with a tracking issue + expiry).
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run: |
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set -e
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TOTAL_FLOOR=25
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# Security-critical paths where a 0%-coverage file is a real risk.
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CRITICAL_PATHS=(
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"internal/handlers/tokens"
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"internal/handlers/workspace_provision"
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"internal/handlers/a2a_proxy"
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"internal/handlers/registry"
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"internal/handlers/secrets"
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"internal/middleware/wsauth"
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"internal/crypto"
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)
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TOTAL=$(go tool cover -func=coverage.out | grep '^total:' | awk '{print $3}' | sed 's/%//')
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echo "Total coverage: ${TOTAL}%"
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if awk "BEGIN{exit !($TOTAL < $TOTAL_FLOOR)}"; then
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echo "::error::Total coverage ${TOTAL}% is below the ${TOTAL_FLOOR}% floor. See COVERAGE_FLOOR.md for ratchet plan."
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exit 1
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fi
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# Aggregate per-file coverage → /tmp/perfile.txt: "<fullpath> <pct>"
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go tool cover -func=coverage.out \
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| grep -v '^total:' \
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| awk '{file=$1; sub(/:[0-9][0-9.]*:.*/, "", file); pct=$NF; gsub(/%/,"",pct); s[file]+=pct; c[file]++}
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END {for (f in s) printf "%s %.1f\n", f, s[f]/c[f]}' \
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> /tmp/perfile.txt
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# Build allowlist — paths relative to workspace-server, one per line.
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# Lines starting with # are comments.
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ALLOWLIST=""
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if [ -f ../.coverage-allowlist.txt ]; then
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ALLOWLIST=$(grep -vE '^(#|[[:space:]]*$)' ../.coverage-allowlist.txt || true)
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fi
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FAILED=0
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WARNED=0
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for path in "${CRITICAL_PATHS[@]}"; do
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while read -r file pct; do
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[[ "$file" == *_test.go ]] && continue
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[[ "$file" == *"$path"* ]] || continue
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awk "BEGIN{exit !($pct < 10)}" || continue
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# Strip the package-import prefix so we can match .coverage-allowlist.txt
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# entries written as paths relative to workspace-server/.
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# Handle both module paths: platform/workspace-server/... and platform/...
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rel=$(echo "$file" | sed 's|^github.com/Molecule-AI/molecule-monorepo/platform/workspace-server/||; s|^github.com/Molecule-AI/molecule-monorepo/platform/||')
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if echo "$ALLOWLIST" | grep -qxF "$rel"; then
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echo "::warning file=workspace-server/$rel::Critical file at ${pct}% coverage (allowlisted, #1823) — fix before expiry."
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WARNED=$((WARNED+1))
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else
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echo "::error file=workspace-server/$rel::Critical file at ${pct}% coverage — must be >=10% (target 80%). See #1823. To acknowledge as known debt, add this path to .coverage-allowlist.txt."
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FAILED=$((FAILED+1))
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fi
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done < /tmp/perfile.txt
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done
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echo ""
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echo "Critical-path check: $FAILED new failures, $WARNED allowlisted warnings."
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if [ "$FAILED" -gt 0 ]; then
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echo ""
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echo "$FAILED security-critical file(s) have <10% test coverage and are"
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echo "NOT in the allowlist. These paths handle auth, tokens, secrets, or"
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echo "workspace provisioning — a 0% file here is the exact gap that let"
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echo "CWE-22, CWE-78, KI-005 slip through in past incidents. Either:"
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echo " (a) add tests to raise coverage above 10%, or"
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echo " (b) add the path to .coverage-allowlist.txt with an expiry date"
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echo " and a tracking issue reference."
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exit 1
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fi
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# Canvas (Next.js) — required check, always runs. See platform-build
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# comment above for the rationale.
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#
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# Supersedes the canvas-build-noop pattern attempted in PR #2321: two
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# jobs sharing `name:` doesn't actually satisfy branch protection
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# because the SKIPPED check run sibling is treated as not-passed
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# regardless of how many SUCCESS siblings it has. Verified empirically
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# on PR #2314 — mergeStateStatus stayed BLOCKED until I collapsed to
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# a single-job-with-conditional-steps shape.
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canvas-build:
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name: Canvas (Next.js)
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needs: changes
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runs-on: ubuntu-latest
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defaults:
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run:
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working-directory: canvas
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steps:
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- if: needs.changes.outputs.canvas != 'true'
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working-directory: .
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run: echo "No canvas/** changes — skipping real build steps; this job always runs to satisfy the required-check name on branch protection."
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- if: needs.changes.outputs.canvas == 'true'
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uses: actions/checkout@de0fac2e4500dabe0009e67214ff5f5447ce83dd # v6.0.2
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- if: needs.changes.outputs.canvas == 'true'
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uses: actions/setup-node@48b55a011bda9f5d6aeb4c2d9c7362e8dae4041e # v6.4.0
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with:
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node-version: '22'
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- if: needs.changes.outputs.canvas == 'true'
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run: rm -f package-lock.json && npm install
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- if: needs.changes.outputs.canvas == 'true'
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run: npm run build
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- if: needs.changes.outputs.canvas == 'true'
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name: Run tests with coverage
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# Coverage instrumentation is configured in canvas/vitest.config.ts
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# (provider: v8, reporters: text + html + json-summary). Step 2 of
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# #1815 — wires coverage into CI so we get a baseline visible on
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# every PR. No threshold gate yet; thresholds dial in (Step 3, also
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# tracked in #1815) after the team sees what current coverage is.
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# Per the inline comment in vitest.config.ts: "first land
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# observability so we can see the baseline, then dial in
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# thresholds + a hard gate" — this PR ships the observability half.
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run: npx vitest run --coverage
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- name: Upload coverage summary as artifact
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if: needs.changes.outputs.canvas == 'true' && always()
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uses: actions/upload-artifact@v3 # pinned to v3 for Gitea act_runner v0.6 compatibility (internal#46)
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with:
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name: canvas-coverage-${{ github.run_id }}
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path: canvas/coverage/
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retention-days: 7
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if-no-files-found: warn
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# MCP Server + SDK removed from CI — now in standalone repos:
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# - github.com/Molecule-AI/molecule-mcp-server (npm CI)
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# - github.com/Molecule-AI/molecule-sdk-python (PyPI CI)
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# e2e-api job moved to .github/workflows/e2e-api.yml (issue #458).
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# It now has workflow-level concurrency (cancel-in-progress: false) so
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# new pushes queue the E2E run rather than cancelling it at the run level.
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# Shellcheck (E2E scripts) — required check, always runs. See
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# platform-build for the rationale.
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shellcheck:
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name: Shellcheck (E2E scripts)
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needs: changes
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runs-on: ubuntu-latest
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steps:
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- if: needs.changes.outputs.scripts != 'true'
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run: echo "No tests/e2e/ or infra/scripts/ changes — skipping real shellcheck; this job always runs to satisfy the required-check name on branch protection."
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- if: needs.changes.outputs.scripts == 'true'
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uses: actions/checkout@de0fac2e4500dabe0009e67214ff5f5447ce83dd # v6.0.2
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- if: needs.changes.outputs.scripts == 'true'
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name: Run shellcheck on tests/e2e/*.sh and infra/scripts/*.sh
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# shellcheck is pre-installed on ubuntu-latest runners (via apt).
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# infra/scripts/ is included because setup.sh + nuke.sh gate the
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# README quickstart — a shellcheck regression there silently breaks
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# new-user onboarding. scripts/ is intentionally excluded until its
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# pre-existing SC3040/SC3043 warnings are cleaned up.
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run: |
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find tests/e2e infra/scripts -type f -name '*.sh' -print0 \
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| xargs -0 shellcheck --severity=warning
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- if: needs.changes.outputs.scripts == 'true'
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name: Lint cleanup-trap hygiene (RFC #2873)
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# Asserts every shell E2E test that calls `mktemp` also installs
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# an EXIT trap. Catches the /tmp-leak class — a missing trap
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# silently leaks scratch into CI runners (~10-100KB per run).
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# See tests/e2e/lint_cleanup_traps.sh for the rule + fix pattern.
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run: bash tests/e2e/lint_cleanup_traps.sh
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- if: needs.changes.outputs.scripts == 'true'
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name: Run E2E bash unit tests (no live infra)
|
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# Pure-bash unit tests for E2E helper libs (lib/*.sh). These pin
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# behavior of dispatch logic that — when broken — silently masks as
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# "Could not resolve authentication method" only after a successful
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# tenant + workspace provision (PR #2571 incident, 2026-05-03). Add
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# new self-contained unit tests here as the lib/ directory grows;
|
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# tests requiring live CP/tenant credentials belong in the dedicated
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# e2e-staging-* workflows, not this job.
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run: |
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bash tests/e2e/test_model_slug.sh
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|
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canvas-deploy-reminder:
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name: Canvas Deploy Reminder
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runs-on: ubuntu-latest
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needs: [changes, canvas-build]
|
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# Only fires on direct pushes to main (i.e. after staging→main promotion).
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if: needs.changes.outputs.canvas == 'true' && github.event_name == 'push' && github.ref == 'refs/heads/main'
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permissions:
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# Required to post commit comments via the GitHub API.
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contents: write
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steps:
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- name: Post deploy reminder as commit comment
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env:
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GH_TOKEN: ${{ secrets.GITHUB_TOKEN }}
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COMMIT_SHA: ${{ github.sha }}
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RUN_URL: ${{ github.server_url }}/${{ github.repository }}/actions/runs/${{ github.run_id }}
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run: |
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# Write body to a temp file — avoids backtick escaping in shell.
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cat > /tmp/deploy-reminder.md << 'BODY'
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## Canvas build passed ✅ — deploy required
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The `publish-canvas-image` workflow is now building a fresh Docker image
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(`ghcr.io/molecule-ai/canvas:latest`) in the background.
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|
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Once it completes (~3–5 min), apply on the host machine with:
|
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```bash
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cd <runner-workspace>
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git pull origin main
|
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docker compose pull canvas && docker compose up -d canvas
|
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```
|
||
|
||
If you need to rebuild from local source instead (e.g. testing unreleased
|
||
changes or a new `NEXT_PUBLIC_*` URL), use:
|
||
```bash
|
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docker compose build canvas && docker compose up -d canvas
|
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```
|
||
BODY
|
||
printf '\n> Posted automatically by CI · commit `%s` · [build log](%s)\n' \
|
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"$COMMIT_SHA" "$RUN_URL" >> /tmp/deploy-reminder.md
|
||
|
||
gh api \
|
||
--method POST \
|
||
"repos/${{ github.repository }}/commits/${{ github.sha }}/comments" \
|
||
--field "body=@/tmp/deploy-reminder.md"
|
||
|
||
# Python Lint & Test — required check, always runs. See platform-build
|
||
# for the rationale.
|
||
python-lint:
|
||
name: Python Lint & Test
|
||
needs: changes
|
||
runs-on: ubuntu-latest
|
||
env:
|
||
WORKSPACE_ID: test
|
||
defaults:
|
||
run:
|
||
working-directory: workspace
|
||
steps:
|
||
- if: needs.changes.outputs.python != 'true'
|
||
working-directory: .
|
||
run: echo "No workspace/** changes — skipping real lint+test; this job always runs to satisfy the required-check name on branch protection."
|
||
- if: needs.changes.outputs.python == 'true'
|
||
uses: actions/checkout@de0fac2e4500dabe0009e67214ff5f5447ce83dd # v6.0.2
|
||
- if: needs.changes.outputs.python == 'true'
|
||
uses: actions/setup-python@a309ff8b426b58ec0e2a45f0f869d46889d02405 # v6.2.0
|
||
with:
|
||
python-version: '3.11'
|
||
cache: pip
|
||
cache-dependency-path: workspace/requirements.txt
|
||
- if: needs.changes.outputs.python == 'true'
|
||
run: pip install -r requirements.txt pytest pytest-asyncio pytest-cov
|
||
# Coverage flags + fail-under floor moved into workspace/pytest.ini
|
||
# (issue #1817) so local `pytest` and CI use identical config.
|
||
- if: needs.changes.outputs.python == 'true'
|
||
run: python -m pytest --tb=short
|
||
|
||
- if: needs.changes.outputs.python == 'true'
|
||
name: Per-file critical-path coverage (MCP / inbox / auth)
|
||
# MCP-critical Python files have a per-file floor on top of the
|
||
# 86% total floor in pytest.ini. Rationale (issue #2790, after
|
||
# the PR #2766 → PR #2771 cycle): the total floor averages ~6000
|
||
# lines, so a single MCP file could regress to ~50% with no
|
||
# complaint as long as other modules compensate. These five
|
||
# files handle multi-tenant routing + auth + inbox dispatch —
|
||
# a coverage drop here is the same risk shape as a Go-side
|
||
# workspace-server token/secrets file dropping below 10%.
|
||
#
|
||
# Floor 75% sits below current actuals (80-96%) so this gate is
|
||
# strictly additive — no existing PR fails. Ratchet plan in
|
||
# COVERAGE_FLOOR.md.
|
||
run: |
|
||
set -e
|
||
PER_FILE_FLOOR=75
|
||
CRITICAL_FILES=(
|
||
"a2a_mcp_server.py"
|
||
"mcp_cli.py"
|
||
"a2a_tools.py"
|
||
"a2a_tools_inbox.py"
|
||
"inbox.py"
|
||
"platform_auth.py"
|
||
)
|
||
|
||
# pytest already wrote .coverage; emit a JSON view scoped to
|
||
# the critical files so jq/python can read the per-file pct
|
||
# without parsing tabular text. --include uses fnmatch, and
|
||
# the leading "*" allows the file to live anywhere under the
|
||
# workspace root (today they sit at workspace/<name>.py).
|
||
INCLUDES=$(printf '*%s,' "${CRITICAL_FILES[@]}")
|
||
INCLUDES="${INCLUDES%,}"
|
||
python -m coverage json -o /tmp/critical-cov.json --include="$INCLUDES"
|
||
|
||
FAILED=0
|
||
for f in "${CRITICAL_FILES[@]}"; do
|
||
# Match by top-level path key (e.g. "a2a_tools.py", not
|
||
# "builtin_tools/a2a_tools.py" — different file at 100%).
|
||
# The keys in coverage.json are paths relative to the run
|
||
# cwd (workspace/), so the critical-path entry sits at the
|
||
# bare basename.
|
||
pct=$(jq -r --arg f "$f" '.files | to_entries | map(select(.key == $f)) | .[0].value.summary.percent_covered // "MISSING"' /tmp/critical-cov.json)
|
||
if [ "$pct" = "MISSING" ]; then
|
||
echo "::error file=workspace/$f::No coverage data — file may have moved or test exclusion mis-set."
|
||
FAILED=$((FAILED+1))
|
||
continue
|
||
fi
|
||
echo "$f: ${pct}%"
|
||
if awk "BEGIN{exit !($pct < $PER_FILE_FLOOR)}"; then
|
||
echo "::error file=workspace/$f::${pct}% < ${PER_FILE_FLOOR}% per-file floor (MCP critical path). See COVERAGE_FLOOR.md."
|
||
FAILED=$((FAILED+1))
|
||
fi
|
||
done
|
||
|
||
if [ "$FAILED" -gt 0 ]; then
|
||
echo ""
|
||
echo "$FAILED MCP critical-path file(s) below the ${PER_FILE_FLOOR}% per-file floor."
|
||
echo "These paths handle multi-tenant routing, auth tokens, and inbox dispatch."
|
||
echo "A coverage drop here is the same risk shape as Go-side tokens/secrets files"
|
||
echo "dropping below 10% (see COVERAGE_FLOOR.md). Either:"
|
||
echo " (a) add tests to raise coverage back above ${PER_FILE_FLOOR}%, or"
|
||
echo " (b) if this is unavoidable historical debt, file an issue and propose"
|
||
echo " adjusting the floor with rationale in COVERAGE_FLOOR.md."
|
||
exit 1
|
||
fi
|
||
|
||
# SDK + plugin validation moved to standalone repo:
|
||
# github.com/Molecule-AI/molecule-sdk-python
|
||
|