Commit Graph

4500 Commits

Author SHA1 Message Date
Hongming Wang
a661e1bf55 fix(e2e): use acurl for registry/register + re-register calls (C18 auth) 2026-04-16 06:15:39 -07:00
Hongming Wang
854d2b688d fix(e2e): read auth_token not token from test-token response 2026-04-16 06:11:32 -07:00
Hongming Wang
edd17cecaa fix(e2e): read auth_token not token from test-token response 2026-04-16 06:11:32 -07:00
Hongming Wang
00ad6b246e debug: add test-token response logging to e2e 2026-04-16 06:08:58 -07:00
Hongming Wang
b1def4a933 debug: add test-token response logging to e2e 2026-04-16 06:08:58 -07:00
Hongming Wang
9f35f1fecf fix(e2e): use admin bearer token for AdminAuth-gated API calls
After the first workspace is created and the test-token endpoint mints
a bearer, HasAnyLiveTokenGlobal returns true. All subsequent calls to
AdminAuth-gated routes (workspace CRUD, events, bundles, etc.) need the
token. Added acurl() helper that attaches the token when available.
2026-04-16 06:05:13 -07:00
Hongming Wang
dacc7425ef fix(e2e): use admin bearer token for AdminAuth-gated API calls
After the first workspace is created and the test-token endpoint mints
a bearer, HasAnyLiveTokenGlobal returns true. All subsequent calls to
AdminAuth-gated routes (workspace CRUD, events, bundles, etc.) need the
token. Added acurl() helper that attaches the token when available.
2026-04-16 06:05:13 -07:00
Hongming Wang
77d6f5e7a0 fix(ci): heredoc indentation in publish workflows + add dev-start.sh
Two fixes:
1. publish-canvas-image.yml + publish-platform-image.yml: the JSON
   heredoc for config.json had leading whitespace from YAML indentation,
   producing invalid JSON. Docker fell back to osxkeychain → -25308.
   Fixed by removing indentation inside the heredoc body.

2. Added scripts/dev-start.sh — one-command local dev environment.
   Starts infra (docker-compose), platform (Go), and canvas (Next.js)
   with proper health checks and cleanup on Ctrl-C.
2026-04-16 05:56:25 -07:00
Hongming Wang
0071b66a59 fix(ci): heredoc indentation in publish workflows + add dev-start.sh
Two fixes:
1. publish-canvas-image.yml + publish-platform-image.yml: the JSON
   heredoc for config.json had leading whitespace from YAML indentation,
   producing invalid JSON. Docker fell back to osxkeychain → -25308.
   Fixed by removing indentation inside the heredoc body.

2. Added scripts/dev-start.sh — one-command local dev environment.
   Starts infra (docker-compose), platform (Go), and canvas (Next.js)
   with proper health checks and cleanup on Ctrl-C.
2026-04-16 05:56:25 -07:00
Hongming Wang
d376c55447 Merge pull request #470 from Molecule-AI/fix/aria-time-sensitive-components
fix(a11y): WCAG ARIA fixes for time-sensitive components
2026-04-16 05:52:23 -07:00
Hongming Wang
d10067697e
Merge pull request #470 from Molecule-AI/fix/aria-time-sensitive-components
fix(a11y): WCAG ARIA fixes for time-sensitive components
2026-04-16 05:52:23 -07:00
Hongming Wang
32abfcf3ae fix: use /bin/sh not bash in clone-manifest (Alpine has no bash) 2026-04-16 05:42:49 -07:00
Hongming Wang
fd719f4d36 fix: use /bin/sh not bash in clone-manifest (Alpine has no bash) 2026-04-16 05:42:49 -07:00
Hongming Wang
cd6b0b75be Merge pull request #462 from Molecule-AI/fix/security-460-461-yaml-injection-error-disclosure
fix(security): YAML-quote skill/prompt names in generateDefaultConfig + opaque file-write errors
2026-04-16 05:40:49 -07:00
Hongming Wang
dc895bb17e
Merge pull request #462 from Molecule-AI/fix/security-460-461-yaml-injection-error-disclosure
fix(security): YAML-quote skill/prompt names in generateDefaultConfig + opaque file-write errors
2026-04-16 05:40:49 -07:00
Security Auditor
6672b5f158 fix(security): YAML-quote skill/prompt names in generateDefaultConfig + opaque file-write errors
Closes #460, #461.

**#460 — YAML injection via unquoted skill/prompt filenames**
`generateDefaultConfig` extracted skill directory names and prompt file
names from user-supplied `body.Files` keys and wrote them directly into
YAML list items without quoting:

  cfg.WriteString("  - " + s + "\n")

`validateRelPath` only blocks path traversal (`../`); it does NOT block
YAML control characters including newlines. On Linux, filenames can
contain newlines, so an attacker with any live workspace bearer token
could submit:

  {"files": {"skills/legit\nruntime: malicious/SKILL.md": "# skill"}}

The generated config.yaml would then contain `runtime: malicious` as a
top-level YAML key, overriding the runtime for workspaces provisioned
from the template.

Fix: extract `yamlEscape` as a reusable local from the same
`strings.NewReplacer` already used for the `name` field (#221) and apply
it to both the `skills:` and `prompt_files:` list items, wrapping each
in double-quotes.

**#461 — Docker error details in ReplaceFiles 500 responses**
`ReplaceFiles` returned `fmt.Sprintf("failed to write files: %v", err)`
in two 500 paths, where `err` comes from Docker API calls and may include
internal container names, volume names, and daemon error messages.

Fix: log the full error server-side and return a static opaque string to
the caller.

Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
2026-04-16 05:40:45 -07:00
Security Auditor
284fb26558 fix(security): YAML-quote skill/prompt names in generateDefaultConfig + opaque file-write errors
Closes #460, #461.

**#460 — YAML injection via unquoted skill/prompt filenames**
`generateDefaultConfig` extracted skill directory names and prompt file
names from user-supplied `body.Files` keys and wrote them directly into
YAML list items without quoting:

  cfg.WriteString("  - " + s + "\n")

`validateRelPath` only blocks path traversal (`../`); it does NOT block
YAML control characters including newlines. On Linux, filenames can
contain newlines, so an attacker with any live workspace bearer token
could submit:

  {"files": {"skills/legit\nruntime: malicious/SKILL.md": "# skill"}}

The generated config.yaml would then contain `runtime: malicious` as a
top-level YAML key, overriding the runtime for workspaces provisioned
from the template.

Fix: extract `yamlEscape` as a reusable local from the same
`strings.NewReplacer` already used for the `name` field (#221) and apply
it to both the `skills:` and `prompt_files:` list items, wrapping each
in double-quotes.

**#461 — Docker error details in ReplaceFiles 500 responses**
`ReplaceFiles` returned `fmt.Sprintf("failed to write files: %v", err)`
in two 500 paths, where `err` comes from Docker API calls and may include
internal container names, volume names, and daemon error messages.

Fix: log the full error server-side and return a static opaque string to
the caller.

Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
2026-04-16 05:40:45 -07:00
Canvas Agent
120b886d00 fix(a11y): WCAG ARIA fixes for time-sensitive components (Fixes #Fix1/#Fix2/#Fix3)
- ApprovalBanner: add role="alert" aria-live="assertive" aria-atomic="true" to
  each pending approval card; aria-hidden="true" on decorative ⚠ icon span
- TerminalTab: add role="status" aria-live="polite" to connection status bar;
  add role="alert" to inline error message div
- BundleDropZone: extract shared processFile(); add hidden <input type="file">
  with id/accept/aria-label; add sr-only focus:not-sr-only keyboard trigger
  button; add role="status" aria-live="polite" to result toast

Tests: 7 new assertions in aria-time-sensitive.test.tsx covering all 3 fixes
(496/496 pass, build clean)

Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
2026-04-16 05:40:40 -07:00
Canvas Agent
66fd7c3ccf fix(a11y): WCAG ARIA fixes for time-sensitive components (Fixes #Fix1/#Fix2/#Fix3)
- ApprovalBanner: add role="alert" aria-live="assertive" aria-atomic="true" to
  each pending approval card; aria-hidden="true" on decorative ⚠ icon span
- TerminalTab: add role="status" aria-live="polite" to connection status bar;
  add role="alert" to inline error message div
- BundleDropZone: extract shared processFile(); add hidden <input type="file">
  with id/accept/aria-label; add sr-only focus:not-sr-only keyboard trigger
  button; add role="status" aria-live="polite" to result toast

Tests: 7 new assertions in aria-time-sensitive.test.tsx covering all 3 fixes
(496/496 pass, build clean)

Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
2026-04-16 05:40:40 -07:00
Canvas Agent
242306d239 fix(canvas): fitView on new workspace provision — respects user zoom level (#426)
Replace setCenter(x, y, {zoom:1}) with fitView({nodes:[{id}]}) in the
molecule:pan-to-node handler (Canvas.tsx). The old implementation forced
zoom=1 regardless of the user's current zoom level, which was jarring when
panned/zoomed away. fitView adapts to whatever zoom the user had and
gracefully fits the new node in view.

Tests:
- Canvas.pan-to-node.test.tsx: fitView called with correct nodeId after
  100ms debounce; debounce coalesces rapid successive events.
- canvas-events-pan.test.ts: molecule:pan-to-node dispatched for new
  provisions only, NOT on restart of an existing node.

Fixes #426.

Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
2026-04-16 05:40:40 -07:00
Canvas Agent
477b6c06b7 fix(canvas): fitView on new workspace provision — respects user zoom level (#426)
Replace setCenter(x, y, {zoom:1}) with fitView({nodes:[{id}]}) in the
molecule:pan-to-node handler (Canvas.tsx). The old implementation forced
zoom=1 regardless of the user's current zoom level, which was jarring when
panned/zoomed away. fitView adapts to whatever zoom the user had and
gracefully fits the new node in view.

Tests:
- Canvas.pan-to-node.test.tsx: fitView called with correct nodeId after
  100ms debounce; debounce coalesces rapid successive events.
- canvas-events-pan.test.ts: molecule:pan-to-node dispatched for new
  provisions only, NOT on restart of an existing node.

Fixes #426.

Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
2026-04-16 05:40:40 -07:00
Hongming Wang
2cb49c1e51 Merge pull request #477 from Molecule-AI/fix/canvas-proxy-test-closenotify
fix(test): canvas proxy test CloseNotify panic
2026-04-16 05:40:36 -07:00
Hongming Wang
16b6e8b53e
Merge pull request #477 from Molecule-AI/fix/canvas-proxy-test-closenotify
fix(test): canvas proxy test CloseNotify panic
2026-04-16 05:40:36 -07:00
Hongming Wang
490a3741a1 fix(test): wrap httptest.ResponseRecorder with CloseNotify for canvas proxy tests
httputil.ReverseProxy calls CloseNotify() which httptest.ResponseRecorder
doesn't implement. Gin casts the writer, causing a panic. Added a
closeNotifyRecorder wrapper with a no-op channel.
2026-04-16 05:40:17 -07:00
Hongming Wang
8b13fff355 fix(test): wrap httptest.ResponseRecorder with CloseNotify for canvas proxy tests
httputil.ReverseProxy calls CloseNotify() which httptest.ResponseRecorder
doesn't implement. Gin casts the writer, causing a panic. Added a
closeNotifyRecorder wrapper with a no-op channel.
2026-04-16 05:40:17 -07:00
rabbitblood
6f414b03ae chore(gitignore): exclude .secrets/ + *.pem from tracking
Local-only secrets (GitHub App private keys, future per-tenant
credentials) live in .secrets/ on the host. Belt-and-braces with the
existing .env exclusion so a stray copy / rename can't leak.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
2026-04-16 05:39:31 -07:00
rabbitblood
57870abe98 chore(gitignore): exclude .secrets/ + *.pem from tracking
Local-only secrets (GitHub App private keys, future per-tenant
credentials) live in .secrets/ on the host. Belt-and-braces with the
existing .env exclusion so a stray copy / rename can't leak.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
2026-04-16 05:39:31 -07:00
Hongming Wang
d776cc0a61 Merge pull request #476 from Molecule-AI/fix/ci-remove-cli-build
fix(ci): remove molecli build step — CLI in standalone repo
2026-04-16 05:28:35 -07:00
Hongming Wang
2a5bc11ee2
Merge pull request #476 from Molecule-AI/fix/ci-remove-cli-build
fix(ci): remove molecli build step — CLI in standalone repo
2026-04-16 05:28:35 -07:00
Hongming Wang
104ae6ca68 fix(ci): remove molecli build step — CLI moved to standalone repo 2026-04-16 05:28:10 -07:00
Hongming Wang
558d5c456a fix(ci): remove molecli build step — CLI moved to standalone repo 2026-04-16 05:28:10 -07:00
Hongming Wang
f30d678d10 Merge pull request #456 from Molecule-AI/fix/issue-418-persist-auth-token
[Backend Engineer] fix(auth): inject fresh bearer token into config volume on every provision
2026-04-16 05:26:32 -07:00
Hongming Wang
2206117beb
Merge pull request #456 from Molecule-AI/fix/issue-418-persist-auth-token
[Backend Engineer] fix(auth): inject fresh bearer token into config volume on every provision
2026-04-16 05:26:32 -07:00
Molecule AI Backend Engineer
92a2c84d76 fix(auth): inject fresh bearer token into config volume on every provision (closes #418)
Container rebuild or volume wipe caused workspaces to lose /configs/.auth_token.
On re-registration the platform returned no auth_token (HasAnyLiveToken==true →
no re-issue), leaving the workspace unable to authenticate any subsequent API call.

Fix: provisionWorkspaceOpts now calls issueAndInjectToken before Start(). This
revokes any existing live tokens (plaintext is irrecoverable from the stored hash,
so rotation is the only safe path) and issues a fresh token that is written into
cfg.ConfigFiles[".auth_token"]. WriteFilesToContainer delivers it to /configs
immediately after ContainerStart, racing safely ahead of the Python adapter's
1-2s startup time.

Failure modes are soft: revoke or issue errors skip injection with a warning;
provisioning continues and the workspace recovers on the next restart.

Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
2026-04-16 05:26:10 -07:00
Molecule AI Backend Engineer
eec59fe63b fix(auth): inject fresh bearer token into config volume on every provision (closes #418)
Container rebuild or volume wipe caused workspaces to lose /configs/.auth_token.
On re-registration the platform returned no auth_token (HasAnyLiveToken==true →
no re-issue), leaving the workspace unable to authenticate any subsequent API call.

Fix: provisionWorkspaceOpts now calls issueAndInjectToken before Start(). This
revokes any existing live tokens (plaintext is irrecoverable from the stored hash,
so rotation is the only safe path) and issues a fresh token that is written into
cfg.ConfigFiles[".auth_token"]. WriteFilesToContainer delivers it to /configs
immediately after ContainerStart, racing safely ahead of the Python adapter's
1-2s startup time.

Failure modes are soft: revoke or issue errors skip injection with a warning;
provisioning continues and the workspace recovers on the next restart.

Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
2026-04-16 05:26:10 -07:00
Hongming Wang
cdc1caf6f9 Merge pull request #467 from Molecule-AI/feat/slack-webhook-validation
[Backend Engineer] feat(channels): Slack adapter with webhook URL validation (#384)
2026-04-16 05:22:47 -07:00
Hongming Wang
7fca9723a0
Merge pull request #467 from Molecule-AI/feat/slack-webhook-validation
[Backend Engineer] feat(channels): Slack adapter with webhook URL validation (#384)
2026-04-16 05:22:47 -07:00
Hongming Wang
a5b77ed7ee Merge pull request #469 from Molecule-AI/feat/per-channel-budget
[Backend Engineer] feat(channels): per-channel message budget with 429 enforcement (#368)
2026-04-16 05:22:39 -07:00
Hongming Wang
d6e7784f11
Merge pull request #469 from Molecule-AI/feat/per-channel-budget
[Backend Engineer] feat(channels): per-channel message budget with 429 enforcement (#368)
2026-04-16 05:22:39 -07:00
Hongming Wang
dda82f5de4 Merge pull request #447 from Molecule-AI/fix/canvas-dark-theme-a11y-sweep
fix(canvas): UIUX Cycle 15 dark-theme & a11y sweep (C1–C5, A1–A4, F1, M1)
2026-04-16 05:21:10 -07:00
Hongming Wang
f308765529
Merge pull request #447 from Molecule-AI/fix/canvas-dark-theme-a11y-sweep
fix(canvas): UIUX Cycle 15 dark-theme & a11y sweep (C1–C5, A1–A4, F1, M1)
2026-04-16 05:21:10 -07:00
Hongming Wang
84882eca7b Merge pull request #457 from Molecule-AI/fix/issue-451-strip-auth-header-canvas-proxy
[Backend Engineer] fix(security): strip Authorization + Cookie in canvas reverse proxy
2026-04-16 05:17:01 -07:00
Hongming Wang
6c374833b0
Merge pull request #457 from Molecule-AI/fix/issue-451-strip-auth-header-canvas-proxy
[Backend Engineer] fix(security): strip Authorization + Cookie in canvas reverse proxy
2026-04-16 05:17:01 -07:00
Hongming Wang
83cf9d0e5f Merge pull request #446 from Molecule-AI/fix/issue-435-registry-error-leak
fix(security): suppress raw DB error from /registry/register response
2026-04-16 05:16:57 -07:00
Hongming Wang
1184232d86
Merge pull request #446 from Molecule-AI/fix/issue-435-registry-error-leak
fix(security): suppress raw DB error from /registry/register response
2026-04-16 05:16:57 -07:00
Hongming Wang
65a98d5206 Merge pull request #443 from Molecule-AI/fix/issue-430-authgate-blank-flash
fix(canvas): replace AuthGate null loading state with zinc-950 backdrop
2026-04-16 05:16:53 -07:00
Hongming Wang
f3dffbba8b
Merge pull request #443 from Molecule-AI/fix/issue-430-authgate-blank-flash
fix(canvas): replace AuthGate null loading state with zinc-950 backdrop
2026-04-16 05:16:53 -07:00
Hongming Wang
2eb11d6f2c Merge pull request #465 from Molecule-AI/fix/memory-recall-flood-limit
[Backend Engineer] fix(memories): hard cap of 50 on recall results (#377)
2026-04-16 05:16:49 -07:00
Hongming Wang
370fb151b2
Merge pull request #465 from Molecule-AI/fix/memory-recall-flood-limit
[Backend Engineer] fix(memories): hard cap of 50 on recall results (#377)
2026-04-16 05:16:49 -07:00
Hongming Wang
61d97e9a34 Merge pull request #468 from Molecule-AI/fix/issue-458-e2e-cancel-protection
ci: extract e2e-api into dedicated workflow with run-level cancel protection (#458)
2026-04-16 05:16:45 -07:00