Follow-up to the workspace-template visibility flip in 558e4fee. After
flipping the 5 private workspace-templates public (#192 root cause),
the harness-replays clone moved one step deeper to the org-templates
list, where 6 of 7 were also private. Hongming-confirmed flip plan:
- 5 of 6 (molecule-dev, free-beats-all, medo-smoke, molecule-worker-gemini,
ux-ab-lab) — flipped public per `feedback_oss_first_repo_visibility_default`.
These are unambiguously OSS-template-shape: generic README, no
customer-shaped names, no creds in content.
- 1 of 6 (reno-stars) — name itself is customer-shaped (would expose
customer/tenant identity). Kept private; removed from manifest.json
per Hongming. Will be handled at provision-time via the per-tenant
credential resolver designed in internal#102 (Layer-3 RFC).
Documents the OSS-surface contract in two places:
- manifest.json _comment: every entry MUST be public; Layer-3 lives elsewhere
- clone-manifest.sh comment block: rationale + the explicit ci-readonly
team-grant escape hatch (review-gated, not default).
Closes the second clone-fail layer of #192. Combined with 558e4fee +
the workspace-template visibility flips, the Pre-clone manifest deps
step should now succeed anonymously for the full registered set.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
Refs Task #165 (Class D AUTO_SYNC_TOKEN plumbing).
main and staging diverged after the 2026-05-06 GitHub-org suspension
because Class D / Class G / feature work landed on staging while
unrelated CI fixes (#34-47, ECR auth-inline, buildx→docker, pre-clone
manifest deps) landed straight on main. Both branches edited the
same workflow files, so every push to main triggered an Auto-sync
run that aborted at `git merge --no-ff origin/main` with 7 content
conflicts:
- .github/workflows/canary-verify.yml (URL: github.com → Gitea)
- .github/workflows/ci.yml (3 URL refs)
- .github/workflows/publish-runtime.yml (cascade: HTTP repo-dispatch
→ Gitea push)
- .github/workflows/publish-workspace-server-image.yml
(drop AWS-action steps;
ECR auth is inline)
- .github/workflows/retarget-main-to-staging.yml (URL)
- manifest.json (lowercase org slug + add
mock-bigorg from main)
- scripts/clone-manifest.sh (keep main's MOLECULE_GITEA_TOKEN
auth path + drop awk-tolower
since manifest is now lowercase)
Resolution: union — staging's post-suspension Gitea/ECR migrations win
on URL/policy edits; main's additive work (mock-bigorg manifest entry,
inline ECR auth, MOLECULE_GITEA_TOKEN basic-auth) is preserved on top.
After this lands, staging is a strict superset of main, so the next
auto-sync run on a push to main will be a clean fast-forward / no-op.
The auto-sync workflow on main also picks up staging's AUTO_SYNC_TOKEN
swap (Class D #26) for free, fixing the latent layer-2 push-auth issue.
Verified locally:
- bash -n scripts/clone-manifest.sh
- python -c 'yaml.safe_load(...)' on each touched workflow
- python -c 'json.load(open(manifest.json))' (21 plugins, 9 templates,
7 org_templates)
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
The Class G #168 PR (#40) caught explicit `github.com/Molecule-AI/<repo>`
URL literals in 23 files but missed two indirect forms:
- `scripts/clone-manifest.sh` lines 50,52 had
`https://github.com/${repo}.git` (the org/repo path is a variable, so the
Class-G regex `github\.com/Molecule-AI/` didn't match).
- `manifest.json` had `"Molecule-AI/<repo>"` (no `github.com` prefix; the
prefix gets prepended by the script).
Together these are what `Dockerfile.tenant`'s stage-3 templates RUN
actually fetches. After PR #40 the harness-replays workflow against
staging still fails with `fatal: could not read Username for
'https://github.com'` because the in-image build is the unfixed shell
loop.
This PR:
- scripts/clone-manifest.sh: replaces both clone URLs with
`https://git.moleculesai.app/${repo}.git`. Anonymous public clones
work for these repos (verified manually).
- manifest.json: lowercases `Molecule-AI/` to `molecule-ai/` to match
Gitea's canonical org slug. Gitea is case-insensitive so both work,
but the lowercase form matches every other URL in the org and is
what main's clone-manifest.sh (PR #38) already standardises on.
This is the minimum-diff staging fix. Sister #173 already shipped a
more sophisticated version on main (with optional MOLECULE_GITEA_TOKEN
auth + per-build pre-clone). When auto-sync resolves the staging-vs-main
conflict, this minimal version gets superseded by the main version
naturally.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
Adds a 'mock' runtime: virtual workspaces with no container, no EC2,
no LLM. Every A2A reply is synthesised from a small canned-variant
pool ('On it!', 'Got it, on it now.', etc.) deterministically seeded
by (workspace_id, request_id).
Built for funding-demo "200-workspace mock org" — renders an
enterprise-scale org chart on the canvas (CEO/VPs/Managers/ICs)
without burning real LLM credits or provisioning 200 EC2 instances.
Surfaces:
- workspace-server/internal/handlers/mock_runtime.go: A2A proxy
short-circuit, canned-reply pool, deterministic variant pick.
- workspace-server/internal/handlers/a2a_proxy.go: gate the
short-circuit before resolveAgentURL (mock has no URL).
- workspace-server/internal/handlers/org_import.go: skip Docker
provisioning for mock workspaces, set status='online' directly,
drop the per-sibling 2s pacing for mock children (collapses
a 200-workspace import from ~7min → ~1s).
- workspace-server/internal/handlers/runtime_registry.go: register
'mock' in the runtime allowlist (manifest + fallback set).
- workspace-server/internal/registry/healthsweep.go +
orphan_sweeper.go: skip mock workspaces in container-health and
stale-token sweeps (no container by design).
- workspace-server/internal/handlers/workspace_restart.go: mirror
the 'external' Restart no-op for mock.
- manifest.json: register the new
Molecule-AI/molecule-ai-org-template-mock-bigorg repo.
Tests: 5 new in mock_runtime_test.go covering happy-path, non-mock
regression guard, determinism, IsMockRuntime trim/case, JSON-RPC
id echo. All existing handler + registry tests still pass.
Local-verified: imported the 200-workspace template against a fresh
postgres+redis, confirmed all 200 land in 'online' and stay there
through the 30s health-sweep window, exercised A2A on CEO + VPs +
Managers + ICs and saw the variant pool rotate.
Org template lives at
Molecule-AI/molecule-ai-org-template-mock-bigorg (created today)
and is imported via the existing /org/import flow on the canvas
Template Palette.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
The cascade-list-vs-manifest drift gate (PR #2556's behavior-based
test) caught my previous-commit cascade additions as 'extra-in-cascade'.
Manifest is the source of truth — restoring there.
All 5 templates have successful publish-image runs in the past 24h
(verified before the cascade fix), and continuous-synth-e2e defaults
to langgraph as its primary canary. None deprecated.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
Deletes the 5 unsupported workspace_templates from manifest.json
(langgraph, crewai, autogen, deepagents, gemini-cli). The runtime
matrix is now claude-code / hermes / openclaw / codex — the four
templates with shipping images, working A2A integration, and active
CI publish-image cascades.
Mirrors the prune in:
- workspace-server/internal/handlers/runtime_registry.go
(fallbackRuntimes for dev/test contexts that boot without the
manifest mounted)
- workspace-server/internal/handlers/workspace_provision.go
(sanitizeRuntime: empty/unknown → "claude-code", was "langgraph";
removes the langgraph/deepagents-specific runtime_config skip
branch — they're no longer supported, so the block is dead)
- tests for both: rename TestEnsureDefaultConfig_LangGraph →
_Hermes, TestEnsureDefaultConfig_EmptyRuntimeDefaultsToLangGraph
→ _ClaudeCode, drop TestEnsureDefaultConfig_DeepAgents,
update TestSanitizeRuntime_Allowlist + the two
TestResolveRestartTemplate_* cases that pinned langgraph-default
as the safe-default name
Why this is safe: production reads manifest.json at boot and uses it
as the authoritative allowlist; the 5 removed runtimes have not
shipped working images for ≥1 release cycle. Any provision request
naming one will now coerce to claude-code (with a log line) instead
of returning a runtime that has no functioning template repo.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
Adds the OpenAI Codex CLI as a Molecule workspace runtime and lands
the design docs that drove the runtime native-MCP push parity work
across claude-code, hermes, openclaw, and codex.
manifest.json:
- Adds `codex` workspace_template entry pointing at the new
Molecule-AI/molecule-ai-workspace-template-codex repo (initial
commit landed there in parallel; 14 files / 1411 LOC). The
workspace-server runtime registry already had `codex` in its
fallback set — this entry makes it manifest-reachable in prod.
docs/integrations/:
- runtime-native-mcp-status.md — index across all four runtime streams
- codex-app-server-adapter-design.md — full design including v2 RPC
sequence, executor skeleton, schema-vs-runtime drift findings
(real codex 0.72 returns thread.id, schema says thread.threadId)
- hermes-platform-plugins-upstream-pr.md — pre-submission draft of
the hermes-agent upstream PR
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
Introduces the UX A/B Lab org template — a 7-agent cell for rapid
landing-page variant generation. The template is also the first
consumer of the new any_of env schema (ANTHROPIC_API_KEY OR
CLAUDE_CODE_OAUTH_TOKEN), so it doubles as an end-to-end fixture
for that feature.
Canvas tree (all claude-code / sonnet):
Design Director
├── UX Researcher
├── Visual Designer
├── React Engineer
├── Deploy Engineer
├── A11y + SEO Auditor ← WCAG AA + canonical/noindex gate
└── Perf Auditor ← Core Web Vitals gate
Template files live in their own standalone repo
(Molecule-AI/molecule-ai-org-template-ux-ab-lab, to be published);
this change adds the manifest.json entry so fresh clones + CI
populate the template via scripts/clone-manifest.sh.
Tests:
- TestOrgTemplate_ClaudeAnyOfAuthPreflight — parses the exact
required_env / recommended_env shape the template ships with
via inline YAML (not on-disk, since org-templates/ is
gitignored in this monorepo) and verifies either member
alternative satisfies the preflight.
SEO safety built into the auditor's system prompt:
- One canonical variant; all others canonicalise to it.
- noindex, follow on non-canonical variants.
- Sitemap contains only the canonical URL.
- No robots.txt disallow (blocked pages can't emit canonical).
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
Ships the monorepo side of molecule-core#1957 (agent identity collapse).
Companion to molecule-ai-plugin-gh-identity (new repo, merged-and-tagged
separately).
Changes:
- manifest.json: add gh-identity plugin to Tier 1 registry
- workspace-server/go.mod: require github.com/Molecule-AI/molecule-ai-plugin-gh-identity
- cmd/server/main.go: build a shared provisionhook.Registry, register
gh-identity first (always), then github-app-auth (gated on GITHUB_APP_ID)
- workspace_provision.go: propagate workspace.Role into
env["MOLECULE_AGENT_ROLE"] before calling the mutator chain, so the
gh-identity plugin can see which agent is booting
- provisionhook/mutator.go: add Registry.Mutators() accessor so
individual-plugin registries can be merged onto a shared one at boot
Boot log gains a line like:
env-mutator chain: [gh-identity github-app-auth]
Effect per workspace:
- env contains MOLECULE_AGENT_ROLE, MOLECULE_OWNER, MOLECULE_ATTRIBUTION_BADGE,
MOLECULE_GH_WRAPPER_B64, MOLECULE_GH_WRAPPER_SHA
- Each workspace template's install.sh can decode + install the wrapper at
/usr/local/bin/gh, intercepting @me assignment and prepending agent
attribution on PR/issue creates
Does not break existing workspaces — absent workspace.role, the plugin is
a no-op. Absent install.sh updates in each template, the env vars are
simply unused.
Follow-up template PRs (hermes, claude-code, langgraph, etc.) each add
~15 lines to install.sh to decode + install the wrapper.
Ref: #1957
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
- Remove compiled workspace-server/server binary from git
- Fix .gitignore, .gitattributes, .githooks/pre-commit for renamed dirs
- Fix CI workflow path filters (workspace-template → workspace)
- Replace real EC2 IP and personal slug in test_saas_tenant.sh
- Scrub molecule-controlplane references in docs
- Fix stale workspace-template/ paths in provisioner, handlers, tests
- Clean tracked Python cache files
Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
Code review fixes:
- 🟡#1: Replace python3 with jq in Dockerfile template stages (~50MB → ~2MB)
- 🟡#2: Add clone count verification to scripts/clone-manifest.sh
(set -e + expected vs actual count check — fails build if any clone fails)
- 🟡#3: Drop 'unsafe-eval' from CSP (not needed for Next.js production
standalone builds, only dev mode). Updated test assertion.
- 🟡#4: Remove broken pyproject.toml from workspace-template/ (it claimed
to package as molecule-ai-workspace-runtime but the directory structure
didn't match — the real package ships from the standalone repo)
- 🔵#1: Add version-pinning TODO comment to manifest.json
- 🔵#3: Add full repo URLs + test counts for SDK/MCP/CLI/runtime in CLAUDE.md
Security (GitGuardian alert):
- Removed Telegram bot token (8633739353:AA...) from template-molecule-dev
pm/.env — replaced with ${TELEGRAM_BOT_TOKEN} placeholder
- Removed Claude OAuth token (sk-ant-oat01-...) from template-molecule-dev
root .env — replaced with ${CLAUDE_CODE_OAUTH_TOKEN} placeholder
- Both tokens need immediate rotation by the operator
Tests: Platform middleware tests updated + all pass.
Remove plugins/, workspace-configs-templates/, org-templates/ dirs (now
in standalone repos). Add manifest.json listing all 33 repos and
scripts/clone-manifest.sh to clone them. Both Dockerfiles now use the
manifest script instead of 33 hardcoded git-clone lines.
Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
