forked from molecule-ai/molecule-core
fix(ci): pre-clone manifest deps in workflow, drop in-image clone (closes #173)
publish-workspace-server-image.yml could not run on Gitea Actions because Dockerfile.tenant's stage 3 ran `git clone` against private Gitea repos from inside the Docker build context, where no auth path exists. Every workspace-server rebuild required a manual operator-host push. Move cloning to the trusted CI context (where AUTO_SYNC_TOKEN — the devops-engineer persona PAT — is naturally available). Dockerfile.tenant now COPYs from .tenant-bundle-deps/, populated by the workflow's new "Pre-clone manifest deps" step. The Gitea token never enters the image. - scripts/clone-manifest.sh: optional MOLECULE_GITEA_TOKEN env embeds basic-auth in the clone URL; redacted in log output. Anonymous fallback preserved for future public-repo path. - .github/workflows/publish-workspace-server-image.yml: new pre-clone step before docker build; injects AUTO_SYNC_TOKEN. Fail-fast if the secret is empty. - workspace-server/Dockerfile.tenant: drop stage 3 (templates), COPY from .tenant-bundle-deps/ instead. Header documents the prereq. - .gitignore: ignore /.tenant-bundle-deps/ so a local build can't accidentally commit cloned repos. Verified locally: clone-manifest.sh with the devops-engineer persona token cloned all 37 repos (9 ws + 7 org + 21 plugins, 4.9MB after .git strip). Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
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@ -102,6 +102,55 @@ jobs:
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run: |
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echo "sha=${GITHUB_SHA::7}" >> "$GITHUB_OUTPUT"
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# Pre-clone manifest deps before docker build (Task #173 fix).
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#
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# Why pre-clone: post-2026-05-06, every workspace-template-* repo on
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# Gitea (codex, crewai, deepagents, gemini-cli, langgraph) plus all
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# 7 org-template-* repos are private. The pre-fix Dockerfile.tenant
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# ran `git clone` inside an in-image stage, which had no auth path
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# — every CI build failed with "fatal: could not read Username for
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# https://git.moleculesai.app". For weeks, every workspace-server
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# rebuild required a manual operator-host push. Now we clone in the
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# trusted CI context (where AUTO_SYNC_TOKEN is naturally available)
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# and Dockerfile.tenant just COPYs from .tenant-bundle-deps/.
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#
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# Token shape: AUTO_SYNC_TOKEN is the devops-engineer persona PAT
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# (see /etc/molecule-bootstrap/agent-secrets.env). Per saved memory
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# `feedback_per_agent_gitea_identity_default`, every CI surface uses
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# a per-persona token, never the founder PAT. clone-manifest.sh
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# embeds it as basic-auth (oauth2:<token>) for the duration of the
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# clones, then strips .git directories — the token never enters
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# the resulting image.
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#
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# Idempotent: if a re-run finds populated dirs, clone-manifest.sh
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# skips them; safe to retrigger via path-filter or workflow_dispatch.
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- name: Pre-clone manifest deps
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env:
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MOLECULE_GITEA_TOKEN: ${{ secrets.AUTO_SYNC_TOKEN }}
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run: |
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set -euo pipefail
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if [ -z "${MOLECULE_GITEA_TOKEN}" ]; then
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echo "::error::AUTO_SYNC_TOKEN secret is empty — register the devops-engineer persona PAT in repo Actions secrets"
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exit 1
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fi
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mkdir -p .tenant-bundle-deps
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bash scripts/clone-manifest.sh \
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manifest.json \
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.tenant-bundle-deps/workspace-configs-templates \
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.tenant-bundle-deps/org-templates \
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.tenant-bundle-deps/plugins
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# Sanity-check counts so a silent partial clone fails fast
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# instead of producing a half-empty image.
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ws_count=$(find .tenant-bundle-deps/workspace-configs-templates -mindepth 1 -maxdepth 1 -type d | wc -l)
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org_count=$(find .tenant-bundle-deps/org-templates -mindepth 1 -maxdepth 1 -type d | wc -l)
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plugins_count=$(find .tenant-bundle-deps/plugins -mindepth 1 -maxdepth 1 -type d | wc -l)
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echo "Cloned: ws=$ws_count org=$org_count plugins=$plugins_count"
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# Counts are derived from manifest.json (9 ws / 7 org / 21
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# plugins as of 2026-05-07). If manifest.json grows but the
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# clone step regresses silently, the find above caps at the
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# actual disk state — but clone-manifest.sh's own EXPECTED vs
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# CLONED check (line ~95) is the authoritative fail-fast.
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# Canary-gated release flow:
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# - This step always publishes :staging-<sha> + :staging-latest.
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# - On staging push, staging-CP picks up :staging-latest immediately
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7
.gitignore
vendored
7
.gitignore
vendored
@ -131,6 +131,13 @@ backups/
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# Cloned by publish-workspace-server-image.yml so the Dockerfile's
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# replace-directive path resolves. Lives in its own repo.
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/molecule-ai-plugin-github-app-auth/
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# Tenant-image build context — populated by the workflow's
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# "Pre-clone manifest deps" step. Mirrors the public manifest, holds the
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# same content as the three /<>/ dirs above but namespaced under one
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# parent so the Docker build context is a single COPY-friendly tree.
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# Each entry is a transient working-dir, never source-of-truth, never
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# committed.
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/.tenant-bundle-deps/
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# Internal-flavored content lives in Molecule-AI/internal — NEVER in this
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# public monorepo. Migrated 2026-04-23 (CEO directive). The CI workflow
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@ -6,6 +6,29 @@
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# ./scripts/clone-manifest.sh <manifest.json> <ws-templates-dir> <org-templates-dir> <plugins-dir>
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#
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# Requires: git, jq (lighter than python3 — ~2MB vs ~50MB in Alpine)
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#
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# Auth (optional):
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# When MOLECULE_GITEA_TOKEN is set, embed it as the basic-auth password so
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# private Gitea repos clone successfully. When unset, clone anonymously
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# (works only for repos that are public on git.moleculesai.app).
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#
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# This is the path the publish-workspace-server-image.yml workflow uses:
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# it injects AUTO_SYNC_TOKEN (devops-engineer persona PAT, repo:read on
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# the molecule-ai org) so the in-CI pre-clone step succeeds for ALL
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# manifest entries — including the 5 private workspace-template-* repos
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# (codex, crewai, deepagents, gemini-cli, langgraph) and all 7
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# org-template-* repos.
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#
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# The token never enters the Docker image: this script runs in the
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# trusted CI context BEFORE `docker buildx build`, populates
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# .tenant-bundle-deps/, then `Dockerfile.tenant` COPYs from there with
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# the .git directories already stripped (see line ~67 below).
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#
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# For backward compatibility — and so a fresh clone works without
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# secrets when (eventually) the workspace-template-* repos flip public —
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# the unset path remains a plain anonymous HTTPS clone. That path will
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# FAIL with "could not read Username" on private repos today; CI MUST
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# set MOLECULE_GITEA_TOKEN.
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set -euo pipefail
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@ -52,11 +75,23 @@ clone_category() {
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# every manifest entry.
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repo_gitea="$(echo "$repo" | awk -F/ '{ printf "%s", tolower($1); for (i=2; i<=NF; i++) printf "/%s", $i; print "" }')"
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echo " cloning $repo_gitea -> $target_dir/$name (ref=$ref)"
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if [ "$ref" = "main" ]; then
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git clone --depth=1 -q "https://git.moleculesai.app/${repo_gitea}.git" "$target_dir/$name"
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# Build the clone URL. When MOLECULE_GITEA_TOKEN is set (CI path)
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# embed it as basic-auth so private repos succeed. The username
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# part ("oauth2") is conventional and ignored by Gitea — only the
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# token-as-password is verified.
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if [ -n "${MOLECULE_GITEA_TOKEN:-}" ]; then
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clone_url="https://oauth2:${MOLECULE_GITEA_TOKEN}@git.moleculesai.app/${repo_gitea}.git"
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display_url="https://oauth2:***@git.moleculesai.app/${repo_gitea}.git"
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else
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git clone --depth=1 -q --branch "$ref" "https://git.moleculesai.app/${repo_gitea}.git" "$target_dir/$name"
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clone_url="https://git.moleculesai.app/${repo_gitea}.git"
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display_url="$clone_url"
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fi
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echo " cloning $display_url -> $target_dir/$name (ref=$ref)"
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if [ "$ref" = "main" ]; then
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git clone --depth=1 -q "$clone_url" "$target_dir/$name"
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else
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git clone --depth=1 -q --branch "$ref" "$clone_url" "$target_dir/$name"
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fi
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CLONED=$((CLONED + 1))
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i=$((i + 1))
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@ -3,14 +3,34 @@
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# Serves both the API (Go on :8080) and the UI (Node.js on :3000) in a
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# single container. Go reverse-proxies unknown routes to canvas.
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#
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# Templates are cloned from standalone GitHub repos at build time so the
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# monorepo doesn't need to carry them. The repos are public; no auth.
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# Templates + plugins are NOT cloned at build time. They are pre-cloned
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# in the trusted CI context (or operator host) by
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# `scripts/clone-manifest.sh` into `.tenant-bundle-deps/` and COPYed in.
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# The reason: post-2026-05-06, every workspace-template-* repo on Gitea
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# (codex, crewai, deepagents, gemini-cli, langgraph) plus all 7
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# org-template-* repos are private, so the Docker build can't `git clone`
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# from inside the build context — there's no auth path that doesn't leak
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# the Gitea token into an image layer. Pre-cloning keeps the token in
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# the CI environment only; the resulting image carries the cloned trees
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# with `.git` already stripped (see clone-manifest.sh).
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#
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# Build context: repo root.
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# Build context: repo root, with `.tenant-bundle-deps/` populated by:
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#
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# MOLECULE_GITEA_TOKEN=<persona-PAT> scripts/clone-manifest.sh \
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# manifest.json \
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# .tenant-bundle-deps/workspace-configs-templates \
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# .tenant-bundle-deps/org-templates \
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# .tenant-bundle-deps/plugins
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#
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# In CI this happens in publish-workspace-server-image.yml's "Pre-clone
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# manifest deps" step (uses AUTO_SYNC_TOKEN = devops-engineer persona).
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# For a manual operator-host build, source the same token from
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# /etc/molecule-bootstrap/agent-secrets.env first.
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#
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# docker buildx build --platform linux/amd64 \
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# -f workspace-server/Dockerfile.tenant \
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# -t registry.fly.io/molecule-tenant:latest \
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# -t <ECR>/molecule-ai/platform-tenant:latest \
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# --build-arg GIT_SHA=<sha> --build-arg NEXT_PUBLIC_PLATFORM_URL= \
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# --push .
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# ── Stage 1: Go platform binary ──────────────────────────────────────
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@ -55,14 +75,7 @@ ENV NEXT_PUBLIC_PLATFORM_URL=$NEXT_PUBLIC_PLATFORM_URL
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ENV NEXT_PUBLIC_WS_URL=$NEXT_PUBLIC_WS_URL
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RUN npm run build
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# ── Stage 3: Clone templates + plugins from manifest.json ─────────────
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FROM alpine:3.20 AS templates
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RUN apk add --no-cache git jq
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COPY manifest.json /manifest.json
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COPY scripts/clone-manifest.sh /scripts/clone-manifest.sh
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RUN chmod +x /scripts/clone-manifest.sh && /scripts/clone-manifest.sh /manifest.json /workspace-configs-templates /org-templates /plugins
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# ── Stage 4: Runtime ──────────────────────────────────────────────────
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# ── Stage 3: Runtime ──────────────────────────────────────────────────
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FROM node:20-alpine
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RUN apk add --no-cache ca-certificates git tzdata openssh-client aws-cli
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@ -87,10 +100,13 @@ COPY --from=go-builder /platform /platform
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COPY --from=go-builder /memory-plugin /memory-plugin
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COPY workspace-server/migrations /migrations
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# Templates + plugins (cloned from GitHub in stage 3)
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COPY --from=templates /workspace-configs-templates /workspace-configs-templates
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COPY --from=templates /org-templates /org-templates
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COPY --from=templates /plugins /plugins
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# Templates + plugins (pre-cloned by scripts/clone-manifest.sh in the
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# trusted CI / operator-host context, .git already stripped — see
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# .tenant-bundle-deps/ in the build context). The Gitea token used to
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# clone them never enters this image.
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COPY .tenant-bundle-deps/workspace-configs-templates /workspace-configs-templates
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COPY .tenant-bundle-deps/org-templates /org-templates
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COPY .tenant-bundle-deps/plugins /plugins
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# Canvas standalone
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WORKDIR /canvas
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